RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CHRNA1P02708 482 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 CYBBP04839 570 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 RPLP2P05387 115 aaKnown RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 CNR2P34972 360 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 SLC26A2P50443 739 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 ST13P50502 369 aaKnown RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 MRPS6P82932 125 aaKnown RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 SETQ01105 290 aaPredicted RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 LMNB2Q03252 620 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 STK3Q13188 491 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 PRR16Q569H4 304 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 MARCH8Q5T0T0 291 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 FAM160B1Q5W0V3 765 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 MIS18BP1Q6P0N0 1132 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 PAQR3Q6TCH7 311 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 ABHD15Q6UXT9 468 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 RBM43Q6ZSC3 357 aaKnown RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 RPAINQ86UA6 219 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 LSRQ86X29 649 aaPredicted RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 MYOCDQ8IZQ8 938 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 PHC3Q8NDX5 983 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 TRAPPC12Q8WVT3 735 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 DNAJB3Q8WWF6 145 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 APBB2Q92870 758 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 TGS1Q96RS0 853 aaKnown RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 IFIH1Q9BYX4 1025 aaKnown RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 FAM49AQ9H0Q0 323 aaPredicted RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 SH3GLB2Q9NR46 395 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 TBC1D22BQ9NU19 505 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 CGNQ9P2M7 1197 aaKnown RBP5.89□□□□□ -1.47
LINC00342-201ENST00000412393 TCEAL9Q9UHQ7 104 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 FAN1Q9Y2M0 1017 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 CDY2AQ9Y6F7 541 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 KIAA1671Q9BY89 1806 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 ATG2AQ2TAZ0 1938 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 CDH23Q9H251 3354 aa5.89□□□□□ -1.47
LINC00342-201ENST00000412393 BRWD1Q9NSI6 2320 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 FNDC1Q4ZHG4 1894 aaPredicted RBP5.88□□□□□ -1.47
LINC00342-201ENST00000412393 CHD9Q3L8U1 2897 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 IGKV6D-21A0A0A0MT36 114 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 SMIM35A0A1B0GVV1 85 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 LINC01553A4QN01 128 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 EPOPA6NHQ4 379 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 SMTNL1A8MU46 457 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 M0QZ92 97 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 HBP1O60381 514 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 NEMFO60524 1076 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 PTMAP06454 111 aaKnown RBP5.88□□□□□ -1.47
LINC00342-201ENST00000412393 GHRP10912 638 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 ZNF20P17024 532 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 POU3F3P20264 500 aaPredicted RBP5.88□□□□□ -1.47
LINC00342-201ENST00000412393 KLRC1P26715 233 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 CIITAP33076 1130 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 NEK4P51957 841 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 ERVK-21P61565 698 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 HTRA4P83105 476 aaPredicted RBP5.88□□□□□ -1.47
LINC00342-201ENST00000412393 MGAT3Q09327 533 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 GRB10Q13322 594 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 DHX8Q14562 1220 aaKnown RBP5.88□□□□□ -1.47
LINC00342-201ENST00000412393 LPIN1Q14693 890 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 ZNF484Q5JVG2 852 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 FBXO47Q5MNV8 452 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 SWSAP1Q6NVH7 229 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 ZPBP2Q6X784 338 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 TMC3Q7Z5M5 1100 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 CCDC60Q8IWA6 550 aaPredicted RBP5.88□□□□□ -1.47
LINC00342-201ENST00000412393 CKAP2LQ8IYA6 745 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 BLIDQ8IZY5 108 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 ATP8B4Q8TF62 1192 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 ZBTB10Q96DT7 871 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 AIFM3Q96NN9 605 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 KRTAP3-1Q9BYR8 98 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 SLITRK6Q9H5Y7 841 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 ZNF302Q9NR11 478 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 PRR13Q9NZ81 148 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 CHD7Q9P2D1 2997 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 THEGQ9P2T0 379 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 MTUS1Q9ULD2 1270 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 INSL6Q9Y581 213 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 PCDHA2Q9Y5H9 948 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 PCDHA10Q9Y5I2 948 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 TRPV2Q9Y5S1 764 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 MTCH2Q9Y6C9 303 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 PRUNE2Q8WUY3 3088 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 COL1A2P08123 1366 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 EYSQ5T1H1 3165 aa5.88□□□□□ -1.47
LINC00342-201ENST00000412393 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.87□□□□□ -1.47
LINC00342-201ENST00000412393 TULP2O00295 520 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 MSH4O15457 936 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 EDIL3O43854 480 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 PFKFB2O60825 505 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 GAS7O60861 476 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 CDKL5O76039 1030 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 ZNF205O95201 554 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 PRAMEF1O95521 474 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 CD52P31358 61 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 CCNFP41002 786 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 AK2P54819 239 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 SCRN1Q12765 414 aa5.87□□□□□ -1.47
LINC00342-201ENST00000412393 ANKRD1Q15327 319 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms