RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 FZD5Q13467 585 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 ZNF638Q14966 1978 aaKnown RBP23.97■■□□□ 1.43
MSH6-202ENST00000411819 INTS6LQ5JSJ4 861 aaKnown RBP23.97■■□□□ 1.43
MSH6-202ENST00000411819 UNC13DQ70J99 1090 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 GVINP1Q7Z2Y8 2422 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 NELFCDQ8IXH7 590 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 OR5B17Q8NGF7 314 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 TTC8Q8TAM2 541 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 ZFYVE19Q96K21 471 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 C7orf25Q9BPX7 421 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 SMG9Q9H0W8 520 aaKnown RBP23.97■■□□□ 1.43
MSH6-202ENST00000411819 GDAP2Q9NXN4 497 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 UBE4BO95155 1302 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 SOX9P48436 509 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 CYP2J2P51589 502 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 ARHGAP29Q52LW3 1261 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 SDHAF4Q5VUM1 108 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 CNNM4Q6P4Q7 775 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 TSSK4Q6SA08 328 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 EPM2AIP1Q7L775 607 aaPredicted RBP23.96■■□□□ 1.43
MSH6-202ENST00000411819 OSTM1Q86WC4 334 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 TOP6BLQ8N6T0 577 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 RDH13Q8NBN7 331 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 BPIFB1Q8TDL5 484 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 LEO1Q8WVC0 666 aaPredicted RBP23.96■■□□□ 1.43
MSH6-202ENST00000411819 CHRDQ9H2X0 955 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 KIAA1586Q9HCI6 787 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 AGPAT3Q9NRZ7 376 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 OBP2AQ9NY56 170 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 GTF3C4Q9UKN8 822 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 PCDHA7Q9UN72 937 aa23.96■■□□□ 1.43
MSH6-202ENST00000411819 HCRTO43612 131 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 CSH1P0DML2 217 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 CSH2P0DML3 217 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 PCSK1P29120 753 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 AFMP43652 599 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 LHX1P48742 406 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 PKP1Q13835 747 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 CCDC142Q17RM4 750 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 DUOXA2Q1HG44 320 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 WDR49Q8IV35 697 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 ZNF687Q8N1G0 1237 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 SPATA18Q8TC71 538 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 ZNF507Q8TCN5 953 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 ATRIPQ8WXE1 791 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 MSANTD3Q96H12 275 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 HPDLQ96IR7 371 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 LRRC3BQ96PB8 259 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 C8orf33Q9H7E9 229 aaPredicted RBP23.95■■□□□ 1.42
MSH6-202ENST00000411819 LMAN1LQ9HAT1 526 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 PCDHGA2Q9Y5H1 932 aa23.95■■□□□ 1.42
MSH6-202ENST00000411819 KIF26AQ9ULI4 1882 aaPredicted RBP23.95■■□□□ 1.42
MSH6-202ENST00000411819 CLIC2O15247 247 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 DLATP10515 647 aaKnown RBP23.94■■□□□ 1.42
MSH6-202ENST00000411819 HMGA1P17096 107 aaKnown RBP23.94■■□□□ 1.42
MSH6-202ENST00000411819 CYP2F1P24903 491 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 AVPR1AP37288 418 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 NLRP12P59046 1061 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 RPL10AP62906 217 aaKnown RBP23.94■■□□□ 1.42
MSH6-202ENST00000411819 SNRNP35Q16560 246 aaKnown RBP23.94■■□□□ 1.42
MSH6-202ENST00000411819 DDR2Q16832 855 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 SOWAHAQ2M3V2 549 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 RESP18Q5W5W9 173 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 HS2ST1Q7LGA3 356 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 SPATA2LQ8IUW3 424 aaPredicted RBP23.94■■□□□ 1.42
MSH6-202ENST00000411819 SLC46A2Q9BY10 475 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 ABCB6Q9NP58 842 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 PRMT8Q9NR22 394 aaPredicted RBP23.94■■□□□ 1.42
MSH6-202ENST00000411819 GTSE1Q9NYZ3 720 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 CFAP45Q9UL16 551 aa23.94■■□□□ 1.42
MSH6-202ENST00000411819 EP300Q09472 2414 aaPredicted RBP23.94■■□□□ 1.42
MSH6-202ENST00000411819 TGFB1I1O43294 461 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 TNNI1P19237 187 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 PLCB2Q00722 1185 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 DNM1Q05193 864 aaKnown RBP23.93■■□□□ 1.42
MSH6-202ENST00000411819 ATL3Q6DD88 541 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 C1orf228Q6PIY5 440 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 CEP57L1Q8IYX8 460 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 CMTM8Q8IZV2 173 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 CELF5Q8N6W0 485 aaKnown RBP23.93■■□□□ 1.42
MSH6-202ENST00000411819 MAB21L3Q8N8X9 362 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 SCFD1Q8WVM8 642 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 MRPS31Q92665 395 aaKnown RBP23.93■■□□□ 1.42
MSH6-202ENST00000411819 FNBP1Q96RU3 617 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 IER2Q9BTL4 223 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 SLC39A2Q9NP94 309 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 THG1LQ9NWX6 298 aaKnown RBP23.93■■□□□ 1.42
MSH6-202ENST00000411819 ZSCAN32Q9NX65 697 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 ZMYM5Q9UJ78 669 aa23.93■■□□□ 1.42
MSH6-202ENST00000411819 SPECC1L-ADORA2AF8WAN1 911 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 F11P03951 625 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 WEE1P30291 646 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 MLLT6P55198 1093 aaPredicted RBP23.92■■□□□ 1.42
MSH6-202ENST00000411819 PSMC1P62191 440 aaKnown RBP23.92■■□□□ 1.42
MSH6-202ENST00000411819 CUL4BQ13620 913 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 LRRC32Q14392 662 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 TMEM150AQ86TG1 271 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 SCN4BQ8IWT1 228 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 GRAMD1CQ8IYS0 662 aa23.92■■□□□ 1.42
MSH6-202ENST00000411819 XXYLT1Q8NBI6 393 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms