RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 IST1P53990 364 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 P2RX3P56373 397 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 WNT3AP56704 352 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 PSG6Q00889 435 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 SP4Q02446 784 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 SF3A2Q15428 464 aaKnown RBP-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 CYP2A13Q16696 494 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 SNAI3Q3KNW1 292 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 SLC25A30Q5SVS4 291 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 BRD3OSQ6XYD6 125 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 C19orf35Q6ZS72 473 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 Q6ZSA8 131 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 SV2BQ7L1I2 683 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 PNPLA5Q7Z6Z6 429 aaPredicted RBP-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 XYLT1Q86Y38 959 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 KIF18BQ86Y91 864 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 CMIPQ8IY22 773 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 LINC00304Q8N9R0 145 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 FANCBQ8NB91 859 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 STAMQ92783 540 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 ST6GALNAC6Q969X2 333 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 DDX31Q9H8H2 851 aaKnown RBP-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 KANSL2Q9H9L4 492 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 KLHL11Q9NVR0 708 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 SMPD3Q9NY59 655 aaPredicted RBP-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 HDAC6Q9UBN7 1215 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 DENND2AQ9ULE3 1009 aa-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZSCAN21Q9Y5A6 473 aaPredicted RBP-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 PLECQ15149 4684 aaKnown RBP-1.07□□□□□ -2.58
RNU4-88P-201ENST00000411220 MUC17Q685J3 4493 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 AKAP13Q12802 2813 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 TRGV11A0A075B6L2 103 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 A1L4Q6 167 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 MTSS1O43312 755 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZBTB11O95625 1053 aaPredicted RBP-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 CD5P06127 495 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 CHRM2P08172 466 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 EBLN1P0CF75 366 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 SRGNP10124 158 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 ACADSP16219 412 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 CD247P20963 164 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 ALDH1B1P30837 517 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 ECE1P42892 770 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 MRPS5P82675 430 aaKnown RBP-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 RBM3P98179 157 aaKnown RBP-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 AMPD2Q01433 879 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 PPATQ06203 517 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 KIF5AQ12840 1032 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 MTX1Q13505 466 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 KCNJ12Q14500 433 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 HNRNPA1L2Q32P51 320 aaKnown RBP-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 CCDC157Q569K6 752 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 FRRS1Q6ZNA5 592 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 TRMT1LQ7Z2T5 733 aaKnown RBP-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 LURAP1LQ8IV03 231 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 P3H2Q8IVL5 708 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 RHOT2Q8IXI1 618 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 PIP4K2CQ8TBX8 421 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 ADAMTS18Q8TE60 1221 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZC3H15Q8WU90 426 aaKnown RBP-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 POM121Q96HA1 1249 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 PGBD1Q96JS3 809 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 FAM20AQ96MK3 541 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 GFI1Q99684 422 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 SRSF8Q9BRL6 282 aaKnown RBP-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 CCSER1Q9C0I3 900 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 ENKD1Q9H0I2 346 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 KDM4CQ9H3R0 1056 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 PDZD7Q9H5P4 517 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 GMIPQ9P107 970 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 KCNE5Q9UJ90 142 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 FBXL7Q9UJT9 491 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 POMT2Q9UKY4 750 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 NOC2LQ9Y3T9 749 aaKnown RBP-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF175Q9Y473 711 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 CHD6Q8TD26 2715 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 LAMA1P25391 3075 aa-1.08□□□□□ -2.58
RNU4-88P-201ENST00000411220 LAMA3Q16787 3333 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 COL27A1Q8IZC6 1860 aaPredicted RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 EPM2AB3EWF7 344 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 C9IYK1 514 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 IGKV1-17P01599 117 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 FGAP02671 866 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 HOXC4P09017 264 aaPredicted RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 UBTFP17480 764 aaKnown RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 LIG4P49917 911 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ANXA11P50995 505 aaKnown RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF84P51523 738 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF136P52737 540 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 PHEXP78562 749 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 MRPL49Q13405 166 aaKnown RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF74Q16587 644 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 KPRPQ5T749 579 aaPredicted RBP-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ARHGAP17Q68EM7 881 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 EFCAB12Q6NXP0 572 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ARHGAP11AQ6P4F7 1023 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 BAIAP2L2Q6UXY1 529 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 ZNF813Q6ZN06 617 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 AGMOQ6ZNB7 445 aa-1.09□□□□□ -2.58
RNU4-88P-201ENST00000411220 MARK2Q7KZI7 788 aaKnown RBP-1.09□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms