RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 HDAC10Q969S8 669 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 RITA1Q96K30 269 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 TEKT5Q96M29 485 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 LENG8Q96PV6 779 aaPredicted RBP2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 OSBPL9Q96SU4 736 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 PRSS22Q9GZN4 317 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 BRD9Q9H8M2 597 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 GPR35Q9HC97 309 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 NRIP3Q9NQ35 241 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 DUSP22Q9NRW4 184 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 MRPS17Q9Y2R5 130 aaKnown RBP2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 NEU2Q9Y3R4 380 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 AFG3L2Q9Y4W6 797 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 RAD54BQ9Y620 910 aa2.05□□□□□ -2.08
RNU2-55P-201ENST00000411146 MYO1FO00160 1098 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 FCHO1O14526 889 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 XPOTO43592 962 aaKnown RBP2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 SGTAO43765 313 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 ZRANB2O95218 330 aaKnown RBP eCLIP2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 VIL1P09327 827 aaKnown RBP2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 MYBL2P10244 700 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 FPR3P25089 353 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 CNGA1P29973 690 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 CD6P30203 668 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 EEFSECP57772 596 aaKnown RBP2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 EVA1CP58658 441 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 RAB39AQ14964 217 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 LY6KQ17RY6 165 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 TRIM71Q2Q1W2 868 aaKnown RBP2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 AWAT1Q58HT5 328 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 RNF219Q5W0B1 726 aaPredicted RBP2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 WASHC2AQ641Q2 1341 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 CEP85Q6P2H3 762 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 SLC4A10Q6U841 1118 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 MIGA2Q7L4E1 593 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 DTX2Q86UW9 622 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 AMOTL1Q8IY63 956 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 GLG1Q92896 1179 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 TNPO1Q92973 898 aaKnown RBP2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 R3HDM4Q96D70 268 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 SLC46A1Q96NT5 459 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 ALG8Q9BVK2 526 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 TTYH3Q9C0H2 523 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 MKS1Q9NXB0 559 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 SLC5A4Q9NY91 659 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 CALCOCO1Q9P1Z2 691 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 TBC1D30Q9Y2I9 924 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 PCDHA1Q9Y5I3 950 aa2.04□□□□□ -2.08
RNU2-55P-201ENST00000411146 TNKSO95271 1327 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 WDR17Q8IZU2 1322 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 CYP2D7A0A087X1C5 515 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 TCRBV5S1A1TA0A578 114 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 KLHL33A6NCF5 533 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 M0QYG6 137 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 BCAR3O75815 825 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 CYP19A1P11511 503 aaPredicted RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 ITGALP20701 1170 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 CERS1P27544 350 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 TKTP29401 623 aaKnown RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 ALDH9A1P49189 494 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 CCT4P50991 539 aaKnown RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 ALDH5A1P51649 535 aaPredicted RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 PDE1AP54750 535 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 LILRA4P59901 499 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 HOXA4Q00056 320 aaPredicted RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 EXOSC9Q06265 439 aaKnown RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 TCF15Q12870 199 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 FAPQ12884 760 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 KIF22Q14807 665 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 ATP2B3Q16720 1220 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 UAP1L1Q3KQV9 507 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 ZIK1Q3SY52 487 aaPredicted RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 GJC2Q5T442 439 aaPredicted RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 SDE2Q6IQ49 451 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 DPY19L3Q6ZPD9 716 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 SLC29A4Q7RTT9 530 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 KRT26Q7Z3Y9 468 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 ZNF280BQ86YH2 543 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 PDSS2Q86YH6 399 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 GALNT16Q8N428 558 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 PCSK9Q8NBP7 692 aaKnown RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 IGFBPL1Q8WX77 278 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 ATG4AQ8WYN0 398 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 ADGRE3Q9BY15 652 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 SEMA4CQ9C0C4 833 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 MRPL46Q9H2W6 279 aaKnown RBP2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 LPAR3Q9UBY5 353 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 TRHDEQ9UKU6 1024 aa2.03□□□□□ -2.08
RNU2-55P-201ENST00000411146 A1L4Q6 167 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 QSOX1O00391 747 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 GABRDO14764 452 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ERC2O15083 957 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 EXOC3O60645 756 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 KATNA1O75449 491 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 ANXA1P04083 346 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 SNHG28P0DPA3 235 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 RARBP10826 455 aa2.02□□□□□ -2.09
RNU2-55P-201ENST00000411146 CYP2A6P11509 494 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms