RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 A1CFQ9NQ94 594 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 PRDM8Q9NQV8 689 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 SIDT1Q9NXL6 827 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 DTLQ9NZJ0 730 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 TBC1D29Q9UFV1 150 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 GIMAP2Q9UG22 337 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 VPS28Q9UK41 221 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 ZDHHC8Q9ULC8 765 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 HS3ST4Q9Y661 456 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 PMF1-BGLAPU3KQ54 211 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 TDRD9Q8NDG6 1382 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 A0A087WZ62 844 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 KCNQ3O43525 872 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 GPR32O75388 356 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 URI1O94763 535 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 INMTO95050 263 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 MATN4O95460 622 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 SGPL1O95470 568 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 LY86O95711 162 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 ENO2P09104 434 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 HNRNPA1P09651 372 aaKnown RBP eCLIP5.53□□□□□ -1.52
LSM5-205ENST00000409952 TGFB3P10600 412 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 DDCP20711 480 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 IL1R2P27930 398 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 SREBF1P36956 1147 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 UBA7P41226 1012 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 RNASE9P60153 205 aaKnown RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 CTXN1P60606 82 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 AP2B1P63010 937 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 CTBP1Q13363 440 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 CUL4AQ13619 759 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 PLCB4Q15147 1175 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 UBE3CQ15386 1083 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 MAPKAPK3Q16644 382 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 C19orf54Q5BKX5 351 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 SLC9C2Q5TAH2 1124 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 LMBRD2Q68DH5 695 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 ABHD15Q6UXT9 468 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 LIPIQ6XZB0 460 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 USP49Q70CQ1 688 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 B4GALNT4Q76KP1 1039 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 KRT73Q86Y46 540 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 SLC44A2Q8IWA5 706 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 YAF2Q8IY57 180 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 NRSN1Q8IZ57 195 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 DCBLD1Q8N8Z6 715 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 OR7D4Q8NG98 312 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 OR56A3Q8NH54 315 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 C20orf173Q96LM9 149 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 GORASP1Q9BQQ3 440 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 RTKNQ9BST9 563 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 TWSG1Q9GZX9 223 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 TAF1DQ9H5J8 278 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 HEYLQ9NQ87 328 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 LANCL2Q9NS86 450 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 USP40Q9NVE5 1235 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 HAUS2Q9NVX0 235 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 POLR3BQ9NW08 1133 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 SPATA6Q9NWH7 488 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 CWC25Q9NXE8 425 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 PI4KBQ9UBF8 816 aa5.53□□□□□ -1.52
LSM5-205ENST00000409952 CFDP1Q9UEE9 299 aaPredicted RBP5.53□□□□□ -1.52
LSM5-205ENST00000409952 TSPY2A6NKD2 308 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 STARD3NLO95772 234 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 LRG1P02750 347 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 PRKCBP05771 671 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 CD1AP06126 327 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 INHBBP09529 407 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 TSPY3P0CV98 308 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 TSPY8P0CW00 308 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 CYP2C8P10632 490 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 EGR1P18146 543 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 RXRAP19793 462 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 OAS2P29728 719 aaKnown RBP5.52□□□□□ -1.53
LSM5-205ENST00000409952 CTNNA1P35221 906 aaKnown RBP5.52□□□□□ -1.53
LSM5-205ENST00000409952 HOXD13P35453 343 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 TSPY1Q01534 308 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 CD69Q07108 199 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 MAP3K12Q12852 859 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 MTM1Q13496 603 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 TRIM71Q2Q1W2 868 aaKnown RBP5.52□□□□□ -1.53
LSM5-205ENST00000409952 PRR31Q5SQ13 230 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 SNX32Q86XE0 403 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 TRMT2AQ8IZ69 625 aaKnown RBP5.52□□□□□ -1.53
LSM5-205ENST00000409952 CHCHD4Q8N4Q1 142 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 OR1N1Q8NGS0 311 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 OR6Y1Q8NGX8 325 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 IGDCC4Q8TDY8 1250 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 CFHR4Q92496 578 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 ATP6V1E2Q96A05 226 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 RBM15Q96T37 977 aaKnown RBP eCLIP5.52□□□□□ -1.53
LSM5-205ENST00000409952 MPHOSPH8Q99549 860 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 BAG1Q99933 345 aaPredicted RBP5.52□□□□□ -1.53
LSM5-205ENST00000409952 C11orf84Q9BUA3 381 aaPredicted RBP5.52□□□□□ -1.53
LSM5-205ENST00000409952 RNPEPQ9H4A4 650 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 TMEM140Q9NV12 185 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 TBX20Q9UMR3 447 aa5.52□□□□□ -1.53
LSM5-205ENST00000409952 H0Y3Z8 333 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 MASP2O00187 686 aa5.51□□□□□ -1.53
LSM5-205ENST00000409952 FSBPO95073 299 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms