RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 GRIA3P42263 894 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 PXNP49023 591 aaPredicted RBP5.16□□□□□ -1.58
PMS1-203ENST00000409593 UCP3P55916 312 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 LOXL3P58215 753 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 IQCB1Q15051 598 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 PTPRRQ15256 657 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 AKNAD1Q5T1N1 836 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 KIAA0895LQ68EN5 471 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 RD3Q7Z3Z2 195 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 ADGRG3Q86Y34 549 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 TSR2Q969E8 191 aaKnown RBP5.16□□□□□ -1.58
PMS1-203ENST00000409593 FKBP10Q96AY3 582 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 SPATA5L1Q9BVQ7 753 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 IL17RBQ9NRM6 502 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 KLC4Q9NSK0 619 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 MED16Q9Y2X0 877 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 TMX2Q9Y320 296 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 ADGRA2Q96PE1 1338 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 ARHGEF17Q96PE2 2063 aaPredicted RBP5.15□□□□□ -1.58
PMS1-203ENST00000409593 CCDC151A5D8V7 595 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 CAPN8A6NHC0 703 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 LINC00473A8K010 186 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 VWC2LB2RUY7 222 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 MARCH6O60337 910 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 PDHA1P08559 390 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 AGFG1P52594 562 aaKnown RBP5.15□□□□□ -1.58
PMS1-203ENST00000409593 LLGL1Q15334 1064 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 PPP4R4Q6NUP7 873 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 ZNF783Q6ZMS7 281 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 BOLLQ8N9W6 283 aaKnown RBP5.15□□□□□ -1.58
PMS1-203ENST00000409593 PBKQ96KB5 322 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 AMBRA1Q9C0C7 1298 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 R3HDMLQ9H3Y0 253 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 PRDM13Q9H4Q3 707 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 C1orf112Q9NSG2 853 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 ASB6Q9NWX5 421 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 XPR1Q9UBH6 696 aa5.15□□□□□ -1.58
PMS1-203ENST00000409593 PPM1DO15297 605 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 PHGDHO43175 533 aaKnown RBP5.15□□□□□ -1.59
PMS1-203ENST00000409593 URI1O94763 535 aaPredicted RBP5.15□□□□□ -1.59
PMS1-203ENST00000409593 NR2F6P10588 404 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 SLC11A2P49281 568 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 CACNA2D1P54289 1103 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 GPSM2P81274 684 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 SATB1Q01826 763 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 TSTD2Q5T7W7 516 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 ARHGAP40Q5TG30 622 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 FBXO42Q6P3S6 717 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 MAEAQ7L5Y9 396 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 GRASPQ7Z6J2 395 aaPredicted RBP5.15□□□□□ -1.59
PMS1-203ENST00000409593 WDR75Q8IWA0 830 aaKnown RBP5.15□□□□□ -1.59
PMS1-203ENST00000409593 MPP5Q8N3R9 675 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.15□□□□□ -1.59
PMS1-203ENST00000409593 OR6B3Q8NGW1 331 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 MOGAT1Q96PD6 335 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 ALG8Q9BVK2 526 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 TRIM54Q9BYV2 358 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 TMEM60Q9H2L4 133 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 KLK15Q9H2R5 256 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 FAM204AQ9H8W3 233 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.15□□□□□ -1.59
PMS1-203ENST00000409593 SLC17A6Q9P2U8 582 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 SERTAD3Q9UJW9 196 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 ST3GAL5Q9UNP4 418 aa5.15□□□□□ -1.59
PMS1-203ENST00000409593 CFAP69A5D8W1 941 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 GOLGA6CA6NDK9 693 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 GOLGA6BA6NDN3 693 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 VSTM5A8MXK1 200 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 GOLGA6DP0CG33 693 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 SLC7A1P30825 629 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 VIPR2P41587 438 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 KRT17Q04695 432 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 CNN3Q15417 329 aaKnown RBP5.14□□□□□ -1.59
PMS1-203ENST00000409593 TBCCQ15814 346 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 ZNF362Q5T0B9 420 aaPredicted RBP5.14□□□□□ -1.59
PMS1-203ENST00000409593 LMBRD2Q68DH5 695 aaPredicted RBP5.14□□□□□ -1.59
PMS1-203ENST00000409593 SWSAP1Q6NVH7 229 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 FAM109AQ8N4B1 249 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 SLC15A4Q8N697 577 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 DNAJC5GQ8N7S2 189 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 CPNE5Q9HCH3 593 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 GOLGA6AQ9NYA3 693 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 DDX20Q9UHI6 824 aaKnown RBP5.14□□□□□ -1.59
PMS1-203ENST00000409593 SHOC2Q9UQ13 582 aa5.14□□□□□ -1.59
PMS1-203ENST00000409593 WDR27A2RRH5 827 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 BTN3A1O00481 513 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 TTLL1O95922 423 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 THP07101 528 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 EBLN1P0CF75 366 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 ZFXP17010 805 aaPredicted RBP5.13□□□□□ -1.59
PMS1-203ENST00000409593 SLC13A2Q13183 592 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 ICE2Q659A1 982 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 SFRP4Q6FHJ7 346 aaPredicted RBP5.13□□□□□ -1.59
PMS1-203ENST00000409593 RGS7BPQ6MZT1 257 aaPredicted RBP5.13□□□□□ -1.59
PMS1-203ENST00000409593 PRIMA1Q86XR5 153 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 KBTBD7Q8WVZ9 684 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 PUS7Q96PZ0 661 aaKnown RBP5.13□□□□□ -1.59
PMS1-203ENST00000409593 NELL2Q99435 816 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 ATP6V0A4Q9HBG4 840 aa5.13□□□□□ -1.59
PMS1-203ENST00000409593 ALG13Q9NP73 1137 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms