RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ZBED8Q8IZ13 594 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 RIN2Q8WYP3 895 aaPredicted RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 ULK4Q96C45 1275 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 FTHL17Q9BXU8 183 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 ABI2Q9NYB9 513 aaPredicted RBP17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 TRIM33Q9UPN9 1127 aa17.56■□□□□ 0.4
PCDHA13-202ENST00000409494 FOXN3O00409 490 aaPredicted RBP17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 CYP11B1P15538 503 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 BRD2P25440 801 aaKnown RBP17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 FDFT1P37268 417 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 PRMT2P55345 433 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 C1QBPQ07021 282 aaKnown RBP17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 BST2Q10589 180 aaKnown RBP17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 FOPNLQ96NB1 174 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 CNPY3Q9BT09 278 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 XAB2Q9HCS7 855 aaKnown RBP17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 NR2E3Q9Y5X4 410 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 MROH7Q68CQ1 1323 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 EPHB3P54753 998 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 GUCY1A3Q02108 690 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 MMGT1Q8N4V1 131 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 GRAMD1AQ96CP6 724 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 LTN1O94822 1766 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 TMEM247A6NEH6 219 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 SPATA31C2B4DYI2 1134 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 MEIS2O14770 477 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 TIGD7Q6NT04 549 aaPredicted RBP17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 TBC1D19Q8N5T2 526 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 C1orf131Q8NDD1 294 aaKnown RBP17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 TRPM4Q8TD43 1214 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 UROC1Q96N76 676 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 PI4K2AQ9BTU6 479 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 OLA1Q9NTK5 396 aaKnown RBP17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 SLC30A1Q9Y6M5 507 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 AKAP3O75969 853 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 TOMM70O94826 608 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 SNHG28P0DPA3 235 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 RALBP11234 206 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 OXCT1P55809 520 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 IL31Q6EBC2 164 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 FAM117BQ6P1L5 589 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 USP38Q8NB14 1042 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 PITPNM3Q9BZ71 974 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 VPS11Q9H270 941 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 WDCPQ9H6R7 721 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 RBM12Q9NTZ6 932 aaKnown RBP17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 KLK14Q9P0G3 267 aa17.55■□□□□ 0.4
PCDHA13-202ENST00000409494 SMIM24O75264 130 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 TYK2P29597 1187 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 DNAJB3Q8WWF6 145 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 COL1A2P08123 1366 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 EIF3HO15372 352 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 RBP3P10745 1247 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 FBXO32Q969P5 355 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 PNKPQ96T60 521 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 KDM1AO60341 852 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 TRPA1O75762 1119 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 ZNF286BP0CG31 522 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 KLK7P49862 253 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 ZNF557Q8N988 423 aaPredicted RBP17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 UBA3Q8TBC4 463 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 TBCBQ99426 244 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 NAT9Q9BTE0 207 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 MUC3BQ9H195 1237 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 CISHQ9NSE2 258 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 SMG5Q9UPR3 1016 aaKnown RBP17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 NCAM2O15394 837 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 ZNF177Q13360 481 aaPredicted RBP17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 GPR142Q7Z601 462 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 NKX2-3Q8TAU0 364 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 CHMP6Q96FZ7 201 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 METTL5Q9NRN9 209 aaKnown RBP17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 ATP11BQ9Y2G3 1177 aa17.54■□□□□ 0.4
PCDHA13-202ENST00000409494 ACO1P21399 889 aaKnown RBP17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 IFNA8P32881 189 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 SH2D3CQ8N5H7 860 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 SPATA18Q8TC71 538 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 DDIT4Q9NX09 232 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 PCDHB5Q9Y5E4 795 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 FRMD3A2A2Y4 597 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 CDH16O75309 829 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 MDH1P40925 334 aaKnown RBP17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 ARHGEF7Q14155 803 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 WDR93Q6P2C0 686 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 RASSF3Q86WH2 238 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 RIBC1Q8N443 379 aaPredicted RBP17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 CENPKQ9BS16 269 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 RAB6BQ9NRW1 208 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 TMEM39AQ9NV64 488 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 MOSPD1Q9UJG1 213 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 APOBEC2Q9Y235 224 aaKnown RBP17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 TNFSF13BQ9Y275 285 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 CST8O60676 142 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 PARNO95453 639 aaKnown RBP17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 PTGISQ16647 500 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 LRIG3Q6UXM1 1119 aa17.53■□□□□ 0.4
PCDHA13-202ENST00000409494 CYP2W1Q8TAV3 490 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms