RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 TBCCQ15814 346 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 ZYXQ15942 572 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 DNAL1Q4LDG9 190 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 TTC27Q6P3X3 843 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 NOP9Q86U38 636 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 MARVELD2Q8N4S9 558 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 ATP11CQ8NB49 1132 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 OR6Y1Q8NGX8 325 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 OLIG1Q8TAK6 271 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 CCDC110Q8TBZ0 833 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 ACER1Q8TDN7 264 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 RAD54LQ92698 747 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 SKA1Q96BD8 255 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 C18orf8Q96DM3 657 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 FAM81BQ96LP2 452 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 GOLPH3Q9H4A6 298 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 PRDM16Q9HAZ2 1276 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 METTL5Q9NRN9 209 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 R3HDM2Q9Y2K5 976 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
NIF3L1-204ENST00000409357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 USP17L10C9JJH3 530 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 USP17L12C9JPN9 530 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 USP17L21D6R901 530 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 IPO5O00410 1097 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 CASQ2O14958 399 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 TM7SF2O76062 418 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 MYCP01106 439 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 KRT13P13646 458 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 PON1P27169 355 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 STAT1P42224 750 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 GRIA2P42262 883 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 RGS19P49795 217 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 DNAJC3Q13217 504 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 PTK6Q13882 451 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 CLEC16AQ2KHT3 1053 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ABCB5Q2M3G0 1257 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ANKRD20A4Q4UJ75 823 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 TMEM119Q4V9L6 283 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 SEL1L2Q5TEA6 688 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 PCNX4Q63HM2 1172 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 UGT2A3Q6UWM9 527 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 OTOAQ7RTW8 1153 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ANKS1BQ7Z6G8 1248 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 LRRC6Q86X45 466 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 SNF8Q96H20 258 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 SNX27Q96L92 541 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 DDX50Q9BQ39 737 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ZSWIM1Q9BR11 485 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 MRPS26Q9BYN8 205 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 RAB34Q9BZG1 259 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 VPS11Q9H270 941 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 AS3MTQ9HBK9 375 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 TMOD4Q9NZQ9 345 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 KIAA1522Q9P206 1035 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 PLXNB2O15031 1838 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 GREB1LQ9C091 1923 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 RLFQ13129 1914 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 SERPINB7O75635 380 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 CIB2O75838 187 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ZBED1O96006 694 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 SMIM18P0DKX4 95 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 AKR1B1P15121 316 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ALOX15P16050 662 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 VCLP18206 1134 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 OSBPP22059 807 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 IVDP26440 423 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 PGM1P36871 562 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 CDK16Q00536 496 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 THOC5Q13769 683 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 SIX1Q15475 284 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 EXOC3L4Q17RC7 722 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 CCDC153Q494R4 210 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 HYIQ5T013 277 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 UBAP2Q5T6F2 1119 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 CCDC62Q6P9F0 684 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 FAM47EQ6ZV65 393 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 OTUD6AQ7L8S5 288 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 MTDHQ86UE4 582 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 SLC13A5Q86YT5 568 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 TMEM126BQ8IUX1 230 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ERI1Q8IV48 349 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 CCDC105Q8IYK2 499 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 GRK7Q8WTQ7 553 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 FAM172AQ8WUF8 416 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ZNF75CPQ92670 426 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ALG3Q92685 438 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 DNAJC19Q96DA6 116 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 PNMA5Q96PV4 448 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 TRAIPQ9BWF2 469 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 KCTD10Q9H3F6 313 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ZNF696Q9H7X3 374 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 PLGRKTQ9HBL7 147 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 INIPQ9NRY2 104 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 ARL8BQ9NVJ2 186 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 NINJ2Q9NZG7 142 aa11.17□□□□□ -0.62
NIF3L1-204ENST00000409357 SCHIP1Q9P0W5 487 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms