RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SP8Q8IXZ3 490 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 GPR135Q8IZ08 494 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 PDPRQ8NCN5 879 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 USP13Q92995 863 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 EID2BQ96D98 161 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 C18orf8Q96DM3 657 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 GDF15Q99988 308 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 SENP7Q9BQF6 1050 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 LSM14BQ9BX40 385 aaKnown RBP5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 ZHX3Q9H4I2 956 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 SAGE1Q9NXZ1 904 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 RRN3Q9NYV6 651 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 GRHPRQ9UBQ7 328 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 ATAD2BQ9ULI0 1458 aa5.55□□□□□ -1.52
HMGB3P18-201ENST00000406327 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 TMEM233B4DJY2 109 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 B8ZZF3 427 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 RAB27BO00194 218 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 POLRMTO00411 1230 aaKnown RBP5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 NCAM2O15394 837 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 B4GALT3O60512 393 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 STC2O76061 302 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 KIF20AO95235 890 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 NDST3O95803 873 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 ITGA2BP08514 1039 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 C1QTNF9P0C862 333 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 CKBP12277 381 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 VEGFAP15692 232 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 EPHB4P54760 987 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 LOXL3P58215 753 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 HHEXQ03014 270 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 ELAVL1Q15717 326 aaKnown RBP5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 ADCK5Q3MIX3 580 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 PLA1AQ53H76 456 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 SLFN13Q68D06 897 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 TANGO2Q6ICL3 276 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 KRTAP5-3Q6L8H2 238 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 CYP26C1Q6V0L0 522 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 MED25Q71SY5 747 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 COLGALT2Q8IYK4 626 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 ANKRD35Q8N283 1001 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 GLIS1Q8NBF1 620 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 RNF169Q8NCN4 708 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 NAXEQ8NCW5 288 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 MDGA1Q8NFP4 955 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 OR52N2Q8NGI0 321 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 IPO4Q8TEX9 1081 aaKnown RBP5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 RAPGEF4Q8WZA2 1011 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 ZNF668Q96K58 619 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 LRRC37BQ96QE4 947 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 PNKPQ96T60 521 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 MESP1Q9BRJ9 268 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 KATNAL1Q9BW62 490 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 PLA2G12BQ9BX93 195 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 AGO3Q9H9G7 860 aaKnown RBP5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 ZBTB26Q9HCK0 441 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 SAYSD1Q9NPB0 183 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 PDP2Q9P2J9 529 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 HERC5Q9UII4 1024 aaKnown RBP5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 GJD2Q9UKL4 321 aa5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 EIF4G1Q04637 1599 aaKnown RBP5.54□□□□□ -1.52
HMGB3P18-201ENST00000406327 DRGXA6NNA5 263 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 TRIM38O00635 465 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 NUAK1O60285 661 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 NOBOXO60393 691 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 COQ9O75208 318 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 FDXRP22570 491 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 GCSHP23434 173 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 SLC5A2P31639 672 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 RAP1GAPP47736 663 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 KRT17Q04695 432 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 NSUN2Q08J23 767 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 POSTNQ15063 836 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 SLC5A9Q2M3M2 681 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 FAXCQ5TGI0 409 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 ANKRD45Q5TZF3 282 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 PLAG1Q6DJT9 500 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 KLHL17Q6TDP4 642 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 RINLQ6ZS11 566 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 IL17REQ8NFR9 667 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 RUBCNQ92622 972 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 MPP4Q96JB8 637 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 UBXN10Q96LJ8 280 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 TOX2Q96NM4 488 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 MED15Q96RN5 788 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 RBM15Q96T37 977 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 PRPF18Q99633 342 aaKnown RBP5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 FAM167BQ9BTA0 163 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 SORBS1Q9BX66 1292 aaKnown RBP5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 RNPEPQ9H4A4 650 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 HELLSQ9NRZ9 838 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 TMOD4Q9NZQ9 345 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 AGAP1Q9UPQ3 857 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 CDYLQ9Y232 598 aa5.53□□□□□ -1.52
HMGB3P18-201ENST00000406327 CCDC195A0A1B0GUA6 201 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 AQP12BA6NM10 295 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 DIRC3C9JPN6 131 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 E7ENX8 843 aa5.52□□□□□ -1.53
HMGB3P18-201ENST00000406327 E9PLN8 166 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms