RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 C18orf25Q96B23 403 aaPredicted RBP12.51□□□□□ -0.41
SMS-202ENST00000404933 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
SMS-202ENST00000404933 GDAP1L1Q96MZ0 367 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 ERVK-5Q9HDB9 667 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 PARP2Q9UGN5 583 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 CDY2AQ9Y6F7 541 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 SMIM28A0A1B0GU29 152 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 M0QYV0 167 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 AGPSO00116 658 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 O00370 1275 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 FSCN2O14926 492 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 TTI1O43156 1089 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 ADAMTS4O75173 837 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 MICAL2O94851 1124 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 GSCP56915 257 aaPredicted RBP12.51□□□□□ -0.41
SMS-202ENST00000404933 RPL7AP62424 266 aaKnown RBP12.51□□□□□ -0.41
SMS-202ENST00000404933 TRIM32Q13049 653 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 PIGHQ14442 188 aaPredicted RBP12.51□□□□□ -0.41
SMS-202ENST00000404933 CYP1B1Q16678 543 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 PTPN20Q4JDL3 420 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 FAM47CQ5HY64 1035 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 GLRA4Q5JXX5 417 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 TWF2Q6IBS0 349 aaKnown RBP12.51□□□□□ -0.41
SMS-202ENST00000404933 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
SMS-202ENST00000404933 FAM228AQ86W67 206 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 KATNAL2Q8IYT4 538 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 PRELID2Q8N945 189 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 SEC14L1Q92503 715 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 MAGOHBQ96A72 148 aaKnown RBP12.51□□□□□ -0.41
SMS-202ENST00000404933 C18orf8Q96DM3 657 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 ZNF560Q96MR9 790 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 MCEEQ96PE7 176 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 SYNCQ9H7C4 482 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 FAM114A2Q9NRY5 505 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 PCYOX1Q9UHG3 505 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 RASAL2Q9UJF2 1139 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 GGA2Q9UJY4 613 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 USTQ9Y2C2 406 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 IPPQ9Y573 584 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 SNX9Q9Y5X1 595 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 SIGLEC16A6NMB1 481 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 AOC2O75106 756 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 GJB6O95452 261 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 CYP3A5P20815 502 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 PNPLA4P41247 253 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 SSR1P43307 286 aaKnown RBP12.5□□□□□ -0.41
SMS-202ENST00000404933 HLTFQ14527 1009 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMS-202ENST00000404933 ZNF268Q14587 947 aaPredicted RBP12.5□□□□□ -0.41
SMS-202ENST00000404933 CYP4A22Q5TCH4 519 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 LCLAT1Q6UWP7 414 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 RPAINQ86UA6 219 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 SERINC5Q86VE9 423 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 SESTD1Q86VW0 696 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 NIPA2Q8N8Q9 360 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 CAPNS2Q96L46 248 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 CAPS2Q9BXY5 557 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 MIS12Q9H081 205 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 KLK14Q9P0G3 267 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 CYTH4Q9UIA0 394 aa12.5□□□□□ -0.41
SMS-202ENST00000404933 PIRO00625 290 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 PPEF2O14830 753 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 EIF3HO15372 352 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMS-202ENST00000404933 TOMM70O94826 608 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 ASGR1P07306 291 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 KRT3P12035 628 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
SMS-202ENST00000404933 CST5P28325 142 aaPredicted RBP12.49□□□□□ -0.41
SMS-202ENST00000404933 HOXD10P28358 340 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 CETN2P41208 172 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 GABRB2P47870 512 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 FNTAP49354 379 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 PSMC1P62191 440 aaKnown RBP12.49□□□□□ -0.41
SMS-202ENST00000404933 DEFB115Q30KQ5 88 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 FBXO47Q5MNV8 452 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 LRRC38Q5VT99 294 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 UNC93AQ86WB7 457 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 HACE1Q8IYU2 909 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 C12orf50Q8NA57 414 aaPredicted RBP12.49□□□□□ -0.41
SMS-202ENST00000404933 SMG8Q8ND04 991 aaKnown RBP12.49□□□□□ -0.41
SMS-202ENST00000404933 KLHDC9Q8NEP7 349 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 EXD1Q8NHP7 514 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 DNAI2Q9GZS0 605 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 CHST12Q9NRB3 414 aa12.49□□□□□ -0.41
SMS-202ENST00000404933 VGLL3A8MV65 326 aa12.48□□□□□ -0.41
SMS-202ENST00000404933 GOLGA8SH3BPF8 625 aa12.48□□□□□ -0.41
SMS-202ENST00000404933 PODXLO00592 558 aa12.48□□□□□ -0.41
SMS-202ENST00000404933 RARAP10276 462 aa12.48□□□□□ -0.41
SMS-202ENST00000404933 CCND3P30281 292 aaPredicted RBP12.48□□□□□ -0.41
SMS-202ENST00000404933 GPD2P43304 727 aa12.48□□□□□ -0.41
SMS-202ENST00000404933 GTF2A1P52655 376 aaPredicted RBP12.48□□□□□ -0.41
SMS-202ENST00000404933 TAS2R40P59535 323 aa12.48□□□□□ -0.41
SMS-202ENST00000404933 PDCLQ13371 301 aa12.48□□□□□ -0.41
SMS-202ENST00000404933 SIX1Q15475 284 aaPredicted RBP12.48□□□□□ -0.41
SMS-202ENST00000404933 TRADDQ15628 312 aa12.48□□□□□ -0.41
SMS-202ENST00000404933 KCNA10Q16322 511 aa12.48□□□□□ -0.41
SMS-202ENST00000404933 FOXR1Q6PIV2 292 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms