RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 METTL23Q86XA0 190 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 NT5DC4Q86YG4 428 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 SUGP1Q8IWZ8 645 aaKnown RBP6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 PARP9Q8IXQ6 854 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 SIX5Q8N196 739 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 STKLD1Q8NE28 680 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 PRSS33Q8NF86 280 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 FLCNQ8NFG4 579 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 CXorf38Q8TB03 319 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 PLEKHO2Q8TD55 490 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 GPR152Q8TDT2 470 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 CACTINQ8WUQ7 758 aaKnown RBP6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 CCDC127Q96BQ5 260 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF560Q96MR9 790 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 SCAND2PQ9GZW5 306 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 GZF1Q9H116 711 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 DNAJC25Q9H1X3 360 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 TMLHEQ9NVH6 421 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 EVA1BQ9NVM1 165 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 INTS13Q9NVM9 706 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 IGSF9Q9P2J2 1179 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 FBXL21Q9UKT6 434 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 CA14Q9ULX7 337 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 L1RE1Q9UN81 338 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 DUSP12Q9UNI6 340 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 UBE4BO95155 1302 aa6.21□□□□□ -1.42
HMGB1P20-201ENST00000402555 FAM237AA0A1B0GTK4 181 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 A0A1W2PQ27 194 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 A0A1W2PQ64 194 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 A0A1W2PQD8 194 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 KRBA1A5PL33 1030 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRIM66O15016 1216 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 KIAA0391O15091 583 aaKnown RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 PI15O43692 258 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 EXOC3O60645 756 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 HUS1O60921 280 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 MOSPD3O75425 235 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 RPN1P04843 607 aaKnown RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 SRFP11831 508 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 NPR3P17342 541 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ATF6P18850 670 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 TNNI1P19237 187 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ACAT1P24752 427 aaKnown RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 AVPR2P30518 371 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 PNPLA4P41247 253 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 GPR15P49685 360 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 GPC5P78333 572 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 RBP5P82980 135 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 CYP24A1Q07973 514 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 MYBPC2Q14324 1141 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 KNOP1Q1ED39 458 aaKnown RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 STXBP5Q5T5C0 1151 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 CWF19L1Q69YN2 538 aaKnown RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 TANGO2Q6ICL3 276 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 IQCEQ6IPM2 695 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 PDZD4Q76G19 769 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 RTL10Q7L3V2 364 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 THEM5Q8N1Q8 247 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ELMOD1Q8N336 334 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 PDCL2Q8N4E4 241 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 TMEM105Q8N8V8 129 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 XXYLT1Q8NBI6 393 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 PRR7Q8TB68 274 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 GIPC2Q8TF65 315 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ELMO3Q96BJ8 720 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ANKRD36BP1Q96IX9 119 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF512Q96ME7 567 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZSWIM3Q96MP5 696 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 CGRRF1Q99675 332 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 SEPT5Q99719 369 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 LPIN3Q9BQK8 851 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 PI4K2AQ9BTU6 479 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 LRRC3Q9BY71 257 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 PLA2G2FQ9BZM2 168 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZCWPW1Q9H0M4 648 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 MFSD1Q9H3U5 465 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF334Q9HCZ1 680 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ASAH2Q9NR71 780 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ABI2Q9NYB9 513 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 USP25Q9UHP3 1055 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ITGA11Q9UKX5 1188 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 DSEQ9UL01 958 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 MAPK8IP1Q9UQF2 711 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 ATP6V1DQ9Y5K8 247 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 SNX9Q9Y5X1 595 aa6.2□□□□□ -1.42
HMGB1P20-201ENST00000402555 PTPRZ1P23471 2315 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 A0A1W2PRU2 124 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 ATP2C2O75185 946 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZNF202O95125 648 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 CST3P01034 146 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 TNNC2P02585 160 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 PAX3P23760 479 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 FCARP24071 287 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 PLA2G5P39877 138 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 VIPR2P41587 438 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 ALDH1A3P47895 512 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 EPHB3P54753 998 aa6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 PSMC1P62191 440 aaKnown RBP6.19□□□□□ -1.42
HMGB1P20-201ENST00000402555 SH3BP2P78314 561 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms