RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 UNC93AQ86WB7 457 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 RCOR2Q8IZ40 523 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 MRPL45Q9BRJ2 306 aaKnown RBP12.96□□□□□ -0.33
CLIP4-203ENST00000401617 TXLNGYQ9BZA5 131 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 GDAP2Q9NXN4 497 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 NME7Q9Y5B8 376 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 KIF3CO14782 793 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 HSF2BPO75031 334 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 PFKMP08237 780 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 KRT3P12035 628 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.34
CLIP4-203ENST00000401617 CAP1Q01518 475 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 PDCLQ13371 301 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 GDF6Q6KF10 455 aaPredicted RBP12.96□□□□□ -0.34
CLIP4-203ENST00000401617 CXCL17Q6UXB2 119 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 ANKS1BQ7Z6G8 1248 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 SESTD1Q86VW0 696 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 LRRC45Q96CN5 670 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 ZIM3Q96PE6 472 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 OSBPL8Q9BZF1 889 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 DCLK3Q9C098 648 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 DPH5Q9H2P9 285 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 GRHL1Q9NZI5 618 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 USTQ9Y2C2 406 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 IPPQ9Y573 584 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 TRPV2Q9Y5S1 764 aa12.96□□□□□ -0.34
CLIP4-203ENST00000401617 M0QYV0 167 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
CLIP4-203ENST00000401617 RNF40O75150 1001 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 PGK1P00558 417 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 RALAP11233 206 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 TCF4P15884 667 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 GBP1P32455 592 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 FLT3P36888 993 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 COPS2P61201 443 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 PRKCZQ05513 592 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 CACNB2Q08289 660 aaPredicted RBP12.95□□□□□ -0.34
CLIP4-203ENST00000401617 TRIM32Q13049 653 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 SOWAHAQ2M3V2 549 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 GLRA4Q5JXX5 417 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 ZDHHC24Q6UX98 284 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 POLNQ7Z5Q5 900 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 SERINC5Q86VE9 423 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 KLHDC9Q8NEP7 349 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 RIN2Q8WYP3 895 aaPredicted RBP12.95□□□□□ -0.34
CLIP4-203ENST00000401617 SPC25Q9HBM1 224 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 HOMER3Q9NSC5 361 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 ADAM21Q9UKJ8 722 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 SNX9Q9Y5X1 595 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 CDY2AQ9Y6F7 541 aa12.95□□□□□ -0.34
CLIP4-203ENST00000401617 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 RARBP10826 455 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 ATF7P17544 494 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 PNPLA4P41247 253 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 NFX1Q12986 1120 aaKnown RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 UAP1Q16222 522 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 SPDYCQ5MJ68 293 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 CFAP58Q5T655 872 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 CYP4F22Q6NT55 531 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 CCDC105Q8IYK2 499 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 ARFGAP1Q8N6T3 406 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 ARRDC4Q8NCT1 418 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 JOSD2Q8TAC2 188 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 RBM41Q96IZ5 413 aaKnown RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 SLITRK1Q96PX8 696 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 APOL6Q9BWW8 343 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 FAM129AQ9BZQ8 928 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 TSPAN16Q9UKR8 245 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 OPA1O60313 960 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 PPFIA2O75334 1257 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 RPLP2P05387 115 aaKnown RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 SETSIPP0DME0 302 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 CST5P28325 142 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 LRPAP1P30533 357 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 HSD17B3P37058 310 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 RPL21P46778 160 aaKnown RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 KCNJ1P48048 391 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 MGAT3Q09327 533 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 ACAP1Q15027 740 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 CCNG2Q16589 344 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 ATP13A4Q4VNC1 1196 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 FBXO47Q5MNV8 452 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 ARHGAP17Q68EM7 881 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 LRIG3Q6UXM1 1119 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 SYDE1Q6ZW31 735 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-203ENST00000401617 TMC3Q7Z5M5 1100 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 C12orf29Q8N999 325 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 UBA3Q8TBC4 463 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 KBTBD7Q8WVZ9 684 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 C1orf54Q8WWF1 131 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 WNT8BQ93098 351 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 FMO2Q99518 471 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 TRIM31Q9BZY9 425 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 MIS12Q9H081 205 aa12.94□□□□□ -0.34
CLIP4-203ENST00000401617 CHST7Q9NS84 486 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms