RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SOX10P56693 466 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 ZYXQ15942 572 aaKnown RBP14.7□□□□□ -0.06
APOB-202ENST00000399256 NBPF20Q3BBV1 942 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 MDH1BQ5I0G3 518 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 STYK1Q6J9G0 422 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 SLC39A4Q6P5W5 647 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 C3orf62Q6ZUJ4 267 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 RHPN2Q8IUC4 686 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 BANPQ8N9N5 519 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 ACER1Q8TDN7 264 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 IWS1Q96ST2 819 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 ZNF184Q99676 751 aaPredicted RBP14.7□□□□□ -0.06
APOB-202ENST00000399256 TUBB6Q9BUF5 446 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 EXOC7Q9UPT5 735 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 IVNS1ABPQ9Y6Y0 642 aa14.7□□□□□ -0.06
APOB-202ENST00000399256 LGR5O75473 907 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 BGNP21810 368 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 CHRNA5P30532 468 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 QARSP47897 775 aaKnown RBP14.69□□□□□ -0.06
APOB-202ENST00000399256 ARL4CP56559 192 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 TXNRD3NBQ6F5E7 133 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 ALYREFQ86V81 257 aaKnown RBP14.69□□□□□ -0.06
APOB-202ENST00000399256 TMEM161BQ8NDZ6 487 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 IL31RAQ8NI17 732 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 ZDHHC15Q96MV8 337 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 FAM213AQ9BRX8 229 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 DBNDD1Q9H9R9 158 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 MRPL47Q9HD33 250 aaKnown RBP14.69□□□□□ -0.06
APOB-202ENST00000399256 SSU72Q9NP77 194 aaKnown RBP14.69□□□□□ -0.06
APOB-202ENST00000399256 PCMTD2Q9NV79 361 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 SAE1Q9UBE0 346 aaPredicted RBP14.69□□□□□ -0.06
APOB-202ENST00000399256 SHOC2Q9UQ13 582 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 SLX4Q8IY92 1834 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 FCHO1O14526 889 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 RNF8O76064 485 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 MYL2P10916 166 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 DYNLT1P63172 113 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 XKR9Q5GH70 373 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 RCOR2Q8IZ40 523 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 FBXO27Q8NI29 283 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 TMC2Q8TDI7 906 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 MZB1Q8WU39 189 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 RBM41Q96IZ5 413 aaKnown RBP14.69□□□□□ -0.06
APOB-202ENST00000399256 MFSD14AQ96MC6 490 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 FAM111AQ96PZ2 611 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 ST6GALNAC4Q9H4F1 302 aa14.69□□□□□ -0.06
APOB-202ENST00000399256 MTO1Q9Y2Z2 717 aaKnown RBP14.69□□□□□ -0.06
APOB-202ENST00000399256 FAM237BA0A1B0GVD1 139 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 TM9SF1O15321 606 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 LPXNO60711 386 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 PHBP35232 272 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 NPTX2P47972 431 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 VCPP55072 806 aaKnown RBP14.68□□□□□ -0.06
APOB-202ENST00000399256 SNRPFP62306 86 aaKnown RBP14.68□□□□□ -0.06
APOB-202ENST00000399256 NOMO3P69849 1222 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 ADGRD1Q6QNK2 874 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 SPOCD1Q6ZMY3 1216 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 FBXO36Q8NEA4 188 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 ZNF516Q92618 1163 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 GORASP1Q9BQQ3 440 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 WDR83Q9BRX9 315 aaKnown RBP14.68□□□□□ -0.06
APOB-202ENST00000399256 TIPINQ9BVW5 301 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 NMUR2Q9GZQ4 415 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 VPS11Q9H270 941 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 ZNF212Q9UDV6 495 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 H3BRJ5 948 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 DHX15O43143 795 aaKnown RBP14.68□□□□□ -0.06
APOB-202ENST00000399256 DLDP09622 509 aaKnown RBP14.68□□□□□ -0.06
APOB-202ENST00000399256 RARBP10826 455 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 LAMB3Q13751 1172 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 ENOSF1Q7L5Y1 443 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 ZNF677Q86XU0 584 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 MAP4K3Q8IVH8 894 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 ATP11CQ8NB49 1132 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 FEZF2Q8TBJ5 459 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 DCAKDQ8WVC6 231 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 UPF1Q92900 1129 aaKnown RBP eCLIP14.68□□□□□ -0.06
APOB-202ENST00000399256 OXNAD1Q96HP4 312 aaPredicted RBP14.68□□□□□ -0.06
APOB-202ENST00000399256 PPCSQ9HAB8 311 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 ARHGEF4Q9NR80 690 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 GINM1Q9NU53 330 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 MRPL11Q9Y3B7 192 aaKnown RBP14.68□□□□□ -0.06
APOB-202ENST00000399256 DNAJC6O75061 913 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 ENO1P06733 434 aaKnown RBP14.68□□□□□ -0.06
APOB-202ENST00000399256 RASA2Q15283 850 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 OASLQ15646 514 aaKnown RBP14.68□□□□□ -0.06
APOB-202ENST00000399256 BBS9Q3SYG4 887 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 PLEKHA7Q6IQ23 1121 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 TMEM270Q6UE05 265 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 CLPTM1LQ96KA5 538 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 SENP7Q9BQF6 1050 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 PCDHB4Q9Y5E5 795 aa14.68□□□□□ -0.06
APOB-202ENST00000399256 B2RBV5 119 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 F8VP50 259 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 MT-ND3P03897 115 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 GNA15P30679 374 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 GDF10P55107 478 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 IZUMO2Q6UXV1 221 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 PALM2Q8IXS6 379 aa14.67□□□□□ -0.06
APOB-202ENST00000399256 CFAP61Q8NHU2 1237 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms