RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 OSBPL8Q9BZF1 889 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 DNAJC17Q9NVM6 304 aaKnown RBP12.44□□□□□ -0.42
COL25A1-202ENST00000399127 IP6K2Q9UHH9 426 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 AGAP1Q9UPQ3 857 aa12.44□□□□□ -0.42
COL25A1-202ENST00000399127 GRIN2DO15399 1336 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 TMEM88BA6NKF7 163 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 PIK3R2O00459 728 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 DYNC1LI2O43237 492 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-202ENST00000399127 SREBF2Q12772 1141 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 MAP2K5Q13163 448 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 SLC29A2Q14542 456 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 FAM187BQ17R55 369 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 KATNAL2Q8IYT4 538 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 CXorf38Q8TB03 319 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 DCLK3Q9C098 648 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 HMGB1P1B2RPK0 211 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-202ENST00000399127 PAX7P23759 505 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 RFC1P35251 1148 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-202ENST00000399127 IRX1P78414 480 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-202ENST00000399127 TNFAIP2Q03169 654 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 CALCOCO2Q13137 446 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 KLF1Q13351 362 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-202ENST00000399127 TMEM132DQ14C87 1099 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 CCL14Q16627 93 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 DGKDQ16760 1214 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 ODF2Q5BJF6 829 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 C17orf99Q6UX52 265 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 EMC1Q8N766 993 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 SLC4A11Q8NBS3 891 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 HAUS1Q96CS2 278 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 HPDLQ96IR7 371 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 BCO2Q9BYV7 579 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 ELOVL4Q9GZR5 314 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 PABPC3Q9H361 631 aaKnown RBP12.43□□□□□ -0.42
COL25A1-202ENST00000399127 ABHD16BQ9H3Z7 469 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 SYNCQ9H7C4 482 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 CDHR5Q9HBB8 845 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 MTRF1LQ9UGC7 380 aaKnown RBP12.43□□□□□ -0.42
COL25A1-202ENST00000399127 NOVA2Q9UNW9 492 aaKnown RBP12.43□□□□□ -0.42
COL25A1-202ENST00000399127 HES2Q9Y543 173 aa12.43□□□□□ -0.42
COL25A1-202ENST00000399127 TCRBV5S1A1TA0A578 114 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 TLDC2A0PJX2 215 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 TNPO2O14787 897 aaKnown RBP12.42□□□□□ -0.42
COL25A1-202ENST00000399127 TP73O15350 636 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 KRT1P04264 644 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 EIF4BP23588 611 aaKnown RBP12.42□□□□□ -0.42
COL25A1-202ENST00000399127 ELF1P32519 619 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 PSMC4P43686 418 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 MORN1Q5T089 497 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 DENND2CQ68D51 928 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 MFSD7Q6UXD7 560 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 KDM7AQ6ZMT4 941 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 JOSD2Q8TAC2 188 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 ART4Q93070 314 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 CPXM1Q96SM3 734 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 FLRT1Q9NZU1 646 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 PCDHGC3Q9UN70 934 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 PSMC1P62191 440 aaKnown RBP12.42□□□□□ -0.42
COL25A1-202ENST00000399127 YWHAEP62258 255 aaKnown RBP12.42□□□□□ -0.42
COL25A1-202ENST00000399127 SKOR1P84550 965 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 POU5F1BQ06416 359 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 NFX1Q12986 1120 aaKnown RBP12.42□□□□□ -0.42
COL25A1-202ENST00000399127 SMTNL2Q2TAL5 461 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 EXD1Q8NHP7 514 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 PWWP2AQ96N64 755 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 ACAP3Q96P50 834 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 TRIP11Q15643 1979 aa12.42□□□□□ -0.42
COL25A1-202ENST00000399127 COL1A2P08123 1366 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 A0A1B0GUA9 196 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 ANKRD33BA6NCL7 494 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 EIF3HO15372 352 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL25A1-202ENST00000399127 CAND2O75155 1236 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 NPTXRO95502 500 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 ADCY8P40145 1251 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 SLCO1A2P46721 670 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 MAGOHP61326 146 aaKnown RBP12.41□□□□□ -0.42
COL25A1-202ENST00000399127 PTPN11Q06124 597 aaPredicted RBP12.41□□□□□ -0.42
COL25A1-202ENST00000399127 KCNT1Q5JUK3 1230 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 GLRA4Q5JXX5 417 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
COL25A1-202ENST00000399127 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 UBA3Q8TBC4 463 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 RAPGEF5Q92565 580 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 HEXIM2Q96MH2 286 aaKnown RBP12.41□□□□□ -0.42
COL25A1-202ENST00000399127 RUNDC3BQ96NL0 473 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 OSMRQ99650 979 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 ADPGKQ9BRR6 497 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 ZNF518BQ9C0D4 1074 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 ZWILCHQ9H900 591 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 DPP3Q9NY33 737 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 PARP2Q9UGN5 583 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 ZSWIM8A7E2V4 1837 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 LRRD1A4D1F6 860 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 M0QYV0 167 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 CILPO75339 1184 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 ERBB2P04626 1255 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 KRT3P12035 628 aa12.41□□□□□ -0.42
COL25A1-202ENST00000399127 PSMA2P25787 234 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms