RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 LRRC37BQ96QE4 947 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 CDV3Q9UKY7 258 aaKnown RBP14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 HMGCRP04035 888 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 SNRNP35Q16560 246 aaKnown RBP14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 CEP70Q8NHQ1 597 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 B4GALNT2Q8NHY0 566 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 AURKCQ9UQB9 309 aa14.89□□□□□ -0.03
PCDHA11-201ENST00000398640 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 PPP2R2AP63151 447 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 BTG3Q14201 252 aaPredicted RBP14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 KLRG1Q96E93 195 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 RNPC3Q96LT9 517 aaKnown RBP14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 SENP7Q9BQF6 1050 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 LTN1O94822 1766 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 ANO9A1A5B4 782 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 SEMA3FQ13275 785 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 KCTD17Q8N5Z5 321 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 CPB2Q96IY4 423 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 WDR18Q9BV38 432 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 ECT2Q9H8V3 914 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 AGO4Q9HCK5 861 aaKnown RBP14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 MON2Q7Z3U7 1717 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 SPTLC1O15269 473 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 PDHA1P08559 390 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 BEX3Q00994 111 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 SGSM1Q2NKQ1 1148 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 SPRYD7Q5W111 196 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 RPAINQ86UA6 219 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 OOSP2Q86WS3 158 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 NUP93Q8N1F7 819 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 FAM96AQ9H5X1 160 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 C6orf203Q9P0P8 240 aaPredicted RBP14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 LIMA1Q9UHB6 759 aaKnown RBP14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 SYNPO2Q9UMS6 1093 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 ITIH6Q6UXX5 1313 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 NDUFS3O75489 264 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 SREBF1P36956 1147 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 IKBKEQ14164 716 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 KRT72Q14CN4 511 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 E2F4Q16254 413 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 P3H1Q32P28 736 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 DAGLBQ8NCG7 672 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 SLC35G2Q8TBE7 412 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 GPR63Q9BZJ6 419 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 TRIM10Q9UDY6 481 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 GRK4P32298 578 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 MTM1Q13496 603 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 RBBP8NLQ8NC74 664 aaPredicted RBP14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 PKP3Q9Y446 797 aa14.88□□□□□ -0.03
PCDHA11-201ENST00000398640 GRID2IPA4D2P6 1211 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 PDXKO00764 312 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 ITGB3P05106 788 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 PNPLA4P41247 253 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 APOL5Q9BWW9 433 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 APEX2Q9UBZ4 518 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 NPEPPSP55786 919 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 TMC7Q7Z402 723 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 CARNMT1Q8N4J0 409 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 SLAIN1Q8ND83 568 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 NT5C1AQ9BXI3 368 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 SMARCAL1Q9NZC9 954 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 ATMINO43313 823 aaPredicted RBP14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 SEC24DO94855 1032 aaPredicted RBP14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 ARP10275 920 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 ACADMP11310 421 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 ZRANB3Q5FWF4 1079 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 PATL1Q86TB9 770 aaKnown RBP14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 PRMT1Q99873 361 aaKnown RBP14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 FBXO2Q9UK22 296 aaPredicted RBP14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 ENDOD1O94919 500 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 RALBP11234 206 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 RAB27AP51159 221 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 ORC1Q13415 861 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 METTL16Q86W50 562 aaKnown RBP14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 DNAJB3Q8WWF6 145 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 PI4K2AQ9BTU6 479 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 RAD18Q9NS91 495 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 ARHGEF38Q9NXL2 777 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 CHORDC1Q9UHD1 332 aaPredicted RBP14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 ADGRA2Q96PE1 1338 aa14.87□□□□□ -0.03
PCDHA11-201ENST00000398640 AGRPO00253 132 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 MYL4P12829 197 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 FLT3LGP49771 235 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 SMTNL2Q2TAL5 461 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 TAF2Q6P1X5 1199 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 PTPRN2Q92932 1015 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 MFSD1Q9H3U5 465 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 RAB6BQ9NRW1 208 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 XPO7Q9UIA9 1087 aaKnown RBP14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 UBQLN1Q9UMX0 589 aaKnown RBP14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 GJC2Q5T442 439 aaPredicted RBP14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 RIC1Q4ADV7 1423 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 PBLDP30039 288 aaPredicted RBP14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 CTCFP49711 727 aaPredicted RBP14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 PTRHD1Q6GMV3 140 aaKnown RBP14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 RCOR2Q8IZ40 523 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 VGLL2Q8N8G2 317 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 MRPL40Q9NQ50 206 aaKnown RBP14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 KANSL3Q9P2N6 904 aa14.86□□□□□ -0.03
PCDHA11-201ENST00000398640 AHDC1Q5TGY3 1603 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms