RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ATXN7L3BQ96GX2 97 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 CNPY3Q9BT09 278 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 RAB21Q9UL25 225 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 LRRIQ3A6PVS8 624 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 CES2O00748 559 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 NVLO15381 856 aaKnown RBP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 FAM107AO95990 144 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 PRKCIP41743 596 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 CNTN2Q02246 1040 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 MORF4L2Q15014 288 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 MCOLN2Q8IZK6 566 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 VCPIP1Q96JH7 1222 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 GNGT2O14610 69 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 NCAM1P13591 858 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 PPATQ06203 517 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 NSUN2Q08J23 767 aaKnown RBP eCLIP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 PDK2Q15119 407 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 GRAMD1BQ3KR37 738 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 FOXR2Q6PJQ5 311 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 SRLQ86TD4 932 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 ARHGEF19Q8IW93 802 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 BRSK2Q8IWQ3 736 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 ZNF606Q8WXB4 792 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 SPDL1Q96EA4 605 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 TSSK1BQ9BXA7 367 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 CATSPERBQ9H7T0 1116 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 PCDHAC2Q9Y5I4 1007 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 E5RI56 91 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 GSTA4O15217 222 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 HNRNPCL1O60812 293 aaKnown RBP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 CXCL8P10145 99 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 MCF2P10911 925 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 CASP5P51878 434 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 PTENP60484 403 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 CCNG2Q16589 344 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 HIPK4Q8NE63 616 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 REPS2Q8NFH8 660 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 SH3TC2Q8TF17 1288 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 TMEM176AQ96HP8 235 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 MMTAG2Q9BU76 263 aaKnown RBP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 ASCC2Q9H1I8 757 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 SCOCQ9UIL1 159 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 UBIAD1Q9Y5Z9 338 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 UBA6A0AVT1 1052 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 ACKR2O00590 384 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 SPRP35270 261 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 CTCFP49711 727 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 SEC24CP53992 1094 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 KCNA1Q09470 495 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 ORC1Q13415 861 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 MRPL40Q9NQ50 206 aaKnown RBP14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 LMCD1Q9NZU5 365 aa14.86□□□□□ -0.03
PCDHGA11-201ENST00000398587 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 POLBP06746 335 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 GLI1P08151 1106 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 BCAT1P54687 386 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 COBLL1Q53SF7 1204 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 C1orf146Q5VVC0 180 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 KDM7AQ6ZMT4 941 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 DNAAF5Q86Y56 855 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 CAVIN3Q969G5 261 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 ASB7Q9H672 318 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 ZBBXA8MT70 800 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 RPLP2P05387 115 aaKnown RBP14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 STX3Q13277 289 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 PTGISQ16647 500 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 CBWD6Q4V339 395 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 CBWD3Q5JTY5 395 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 CBWD5Q5RIA9 395 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 RNF135Q8IUD6 432 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 C4orf32Q8N8J7 132 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 USP33Q8TEY7 942 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 ASIC4Q96FT7 647 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 SEC16BQ96JE7 1060 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 WDR18Q9BV38 432 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 WNT7AO00755 349 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 B3GAT3O94766 335 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 SNHG28P0DPA3 235 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 FCGRTP55899 365 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 SATB1Q01826 763 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 PABPC5Q96DU9 382 aaKnown RBP14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 VTA1Q9NP79 307 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 SARS2Q9NP81 518 aaKnown RBP14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 GPR182O15218 404 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 SLURP2P0DP57 97 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 OR1G1P47890 313 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 MTM1Q13496 603 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 KCNT1Q5JUK3 1230 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 MIIPQ5JXC2 388 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 TMTC4Q5T4D3 741 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 ETNPPLQ8TBG4 499 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 HSD17B14Q9BPX1 270 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 SMYD3Q9H7B4 428 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 DDIT4Q9NX09 232 aa14.85□□□□□ -0.03
PCDHGA11-201ENST00000398587 M0QYT0 321 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 ODC1P11926 461 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 EPHB2P29323 1055 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 RNF180Q86T96 592 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 ULK4Q96C45 1275 aa14.84□□□□□ -0.03
PCDHGA11-201ENST00000398587 FGD4Q96M96 766 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms