RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 MRGBPQ9NV56 204 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 SLC4A7Q9Y6M7 1214 aa17.11■□□□□ 0.33
CTDSP2-201ENST00000398073 ADCY3O60266 1144 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 LSM8O95777 96 aaKnown RBP17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 POLBP06746 335 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 TWF2Q6IBS0 349 aaKnown RBP17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 C4orf50Q6ZRC1 276 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 AGAP3Q96P47 875 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 EPAS1Q99814 870 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 TMEM121Q9BTD3 319 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 TMEM39BQ9GZU3 492 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 ING2Q9H160 280 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 FNDC3AQ9Y2H6 1198 aaKnown RBP17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 SIGLEC1Q9BZZ2 1709 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 TULP2O00295 520 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 STMN1P16949 149 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 COPAP53621 1224 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 ZNF772Q68DY9 489 aaPredicted RBP17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 SETD3Q86TU7 594 aaPredicted RBP17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 ABRAQ8N0Z2 381 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 EML1O00423 815 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 DNALI1O14645 258 aaPredicted RBP17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 NUDT17P0C025 328 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 VCPIP1Q96JH7 1222 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 C15orf41Q9Y2V0 281 aa17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
CTDSP2-201ENST00000398073 RBAK-RBAKDNI3L0D1 243 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 OGTO15294 1046 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 ENO3P13929 434 aaPredicted RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 NAMPTP43490 491 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 VCPP55072 806 aaKnown RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 TPI1P60174 286 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 KIRREL3Q8IZU9 778 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 TEKT4Q8WW24 435 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 ZBTB18Q99592 522 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 CGRRF1Q99675 332 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 SMARCAD1Q9H4L7 1026 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 PCYOX1Q9UHG3 505 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 NEMP1O14524 444 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 SNX3O60493 162 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 MYL2P10916 166 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 BIRC2Q13490 618 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 ATG4CQ96DT6 458 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 PRMT7Q9NVM4 692 aaPredicted RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 NCANO14594 1321 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 PTK6Q13882 451 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 ACTL9Q8TC94 416 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 HES6Q96HZ4 224 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 NID2Q14112 1375 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 LOC100653049A0A140TA62 436 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 WTIPA6NIX2 430 aaPredicted RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 C3orf70A6NLC5 250 aaPredicted RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 KRT34O76011 436 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 UBTFL6P0CB48 400 aaPredicted RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 TXNP10599 105 aaKnown RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 FECHP22830 423 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 CAP2P40123 477 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 SULT1E1P49888 294 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 PRAMEP78395 509 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 ELF3P78545 371 aaPredicted RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 KCNA1Q09470 495 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 PDK1Q15118 436 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 WASHC2DQ5SRD0 308 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 IRF2BP2Q7Z5L9 587 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 NOP9Q86U38 636 aaKnown RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 SLC26A11Q86WA9 606 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 MED15Q96RN5 788 aa17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 EML4Q9HC35 981 aaKnown RBP17.09■□□□□ 0.33
CTDSP2-201ENST00000398073 TYW5A2RUC4 315 aaKnown RBP17.08■□□□□ 0.33
CTDSP2-201ENST00000398073 MARSP56192 900 aaKnown RBP17.08■□□□□ 0.33
CTDSP2-201ENST00000398073 LRRC8EQ6NSJ5 796 aa17.08■□□□□ 0.33
CTDSP2-201ENST00000398073 ZKSCAN4Q969J2 545 aaPredicted RBP17.08■□□□□ 0.33
CTDSP2-201ENST00000398073 ZNF263O14978 683 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 TRADDQ15628 312 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 KCNT1Q5JUK3 1230 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 ABI1Q8IZP0 508 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 OR6P1Q8NGX9 317 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 PBXIP1Q96AQ6 731 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 PRMT6Q96LA8 375 aaPredicted RBP17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 SH3GL2Q99962 352 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 AIM2O14862 343 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 GAS2O43903 313 aaKnown RBP17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 CYP3A4P08684 503 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 GYS1P13807 737 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 HSD17B4P51659 736 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 PDCD2Q16342 344 aaPredicted RBP17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 PURBQ96QR8 312 aaKnown RBP17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 AGO4Q9HCK5 861 aaKnown RBP17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 KRT82Q9NSB4 513 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 IL10P22301 178 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 ZBTB17Q13105 803 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 DUPD1Q68J44 220 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 RNF135Q8IUD6 432 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 LNX1Q8TBB1 728 aaPredicted RBP17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 UBA3Q8TBC4 463 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 EPS8L1Q8TE68 723 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 PARD3BQ8TEW8 1205 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 GFM2Q969S9 779 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms