RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 A6NNZ2 444 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 ALDH1A2O94788 518 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 HSPA4LO95757 839 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 P4HBP07237 508 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 DPEP1P16444 411 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 CDC25AP30304 524 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 PRCPP42785 496 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 IFNAR2P48551 515 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 AARSP49588 968 aaKnown RBP eCLIP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 CLCN4P51793 760 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TROAPQ12815 778 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 XKR5Q6UX68 686 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 RHOUQ7L0Q8 258 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 ZSCAN29Q8IWY8 852 aaPredicted RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 ZNF34Q8IZ26 560 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 BLIDQ8IZY5 108 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 CSGALNACT2Q8N6G5 542 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 PIP4K2CQ8TBX8 421 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 DQX1Q8TE96 717 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 EFHD2Q96C19 240 aaPredicted RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TSNARE1Q96NA8 513 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 NUDCD1Q96RS6 583 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 RAD21L1Q9H4I0 556 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 SUGCTQ9HAC7 445 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 LAD1O00515 517 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 NIPSNAP2O75323 286 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 S100A9P06702 114 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 GSTT2P0CG29 244 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 GSTT2BP0CG30 244 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TM4SF4P48230 202 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 NT5C2P49902 561 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TFAP4Q01664 338 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 PFKFB3Q16875 520 aaPredicted RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 C5orf22Q49AR2 442 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 MINDY4Q4G0A6 757 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 FBXO48Q5FWF7 155 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 FAM102BQ5T8I3 360 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 PAPD7Q5XG87 772 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 PPP2R2DQ66LE6 453 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 RAB12Q6IQ22 244 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TTBK2Q6IQ55 1244 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 CYB5D1Q6P9G0 228 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TPTE2Q6XPS3 522 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 GALNTL5Q7Z4T8 443 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 P3H2Q8IVL5 708 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 HACE1Q8IYU2 909 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 ADSSL1Q8N142 457 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 CCDC33Q8N5R6 958 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 SLC4A11Q8NBS3 891 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 COG1Q8WTW3 980 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 RUBCNQ92622 972 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 CHP1Q99653 195 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 TUT1Q9H6E5 874 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 KAT14Q9H8E8 782 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 INIPQ9NRY2 104 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 RHBDL2Q9NX52 303 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 ANAPC5Q9UJX4 755 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 DMTF1Q9Y222 760 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 GDAQ9Y2T3 454 aa6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 CHTOPQ9Y3Y2 248 aaKnown RBP6.92□□□□□ -1.3
TM9SF4-202ENST00000398022 A0A0U1RQJ8 604 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 SNTNA6NMZ2 147 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 PSMD9O00233 223 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 N4BP1O75113 896 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 FLOT1O75955 427 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 ALADP13716 330 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 JAK1P23458 1154 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 HNF4AP41235 474 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 PAFAH1B1P43034 410 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 TKTL1P51854 596 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 OTUD4Q01804 1114 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 CENPCQ03188 943 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 CHRNDQ07001 517 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 FUT2Q10981 343 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 CSTF3Q12996 717 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 XRRA1Q6P2D8 792 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 RGS9BPQ6ZS82 235 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 PHLDB2Q86SQ0 1253 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 EXOC3L1Q86VI1 746 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 KLRG1Q96E93 195 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 BTBD6Q96KE9 485 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 DEPDC7Q96QD5 511 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 CNGB3Q9NQW8 809 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 GLRX2Q9NS18 164 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 TSC22D4Q9Y3Q8 395 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 FADS3Q9Y5Q0 445 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 MYO5AQ9Y4I1 1855 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 PDS5AQ29RF7 1337 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 CNTNAP5Q8WYK1 1306 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 ATXN2Q99700 1313 aaKnown RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 ZSCAN5CA6NGD5 496 aaPredicted RBP6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 CHURC1-FNTBB4DL54 471 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 RPS6KA4O75676 772 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 TOMM70O94826 608 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 ALDH2P05091 517 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 MMP10P09238 476 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 PDHBP11177 359 aa6.91□□□□□ -1.3
TM9SF4-202ENST00000398022 NAGAP17050 411 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms