RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 GET4Q7L5D6 327 aaPredicted RBP27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 DNAI2Q9GZS0 605 aa27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 CRISPLD1Q9H336 500 aa27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 MAGEC2Q9UBF1 373 aaPredicted RBP27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 DOCK6Q96HP0 2047 aa27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 SOAT2O75908 522 aa27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 HAPLN1P10915 354 aaPredicted RBP27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 FMO5P49326 533 aa27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 CYP27A1Q02318 531 aa27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 VEPH1Q14D04 833 aa27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 RBM43Q6ZSC3 357 aaKnown RBP27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 TTC9BQ8N6N2 239 aa27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 SEMA4DQ92854 862 aa27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 CD320Q9NPF0 282 aa27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 ANO10Q9NW15 660 aa27.08■■□□□ 1.93
TSPAN4-207ENST00000397411 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.08■■□□□ 1.935e-7■■■■■ 27.2
TSPAN4-207ENST00000397411 XIRP2A4UGR9 3374 aa27.08■■□□□ 1.92
TSPAN4-207ENST00000397411 SPTBN5Q9NRC6 3674 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 C2CD4DB7Z1M9 353 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 RHOP08100 348 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 PTPN1P18031 435 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 MDH1BQ5I0G3 518 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 CAVIN1Q6NZI2 390 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 FAM171BQ6P995 826 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 ITIH5Q86UX2 942 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 FAM114A1Q8IWE2 563 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 CNOT6LQ96LI5 555 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 NIF3L1Q9GZT8 377 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 CYP3A43Q9HB55 503 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 APOBEC3GQ9HC16 384 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 CEP72Q9P209 647 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 MRPS23Q9Y3D9 190 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 ASB3Q9Y575 518 aa27.07■■□□□ 1.92
TSPAN4-207ENST00000397411 ZNF197O14709 1029 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 MYL4P12829 197 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 MTIF2P46199 727 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 RPL10AP62906 217 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 KCNH2Q12809 1159 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 PDZD4Q76G19 769 aaPredicted RBP27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 TRIM59Q8IWR1 403 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 MYCBPAPQ8TBZ2 947 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 GIPC2Q8TF65 315 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 TNIP3Q96KP6 325 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 MED15Q96RN5 788 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 SDCBP2Q9H190 292 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 ABCB6Q9NP58 842 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 ASAH2Q9NR71 780 aa27.06■■□□□ 1.92
TSPAN4-207ENST00000397411 LRRN2O75325 713 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 AFPP02771 609 aaKnown RBP27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 CYP2F1P24903 491 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 ASPAP45381 313 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 MARSP56192 900 aaKnown RBP27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 RNF135Q8IUD6 432 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 SCN4BQ8IWT1 228 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 MYLPFQ96A32 169 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 PKMYT1Q99640 499 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 DPEP3Q9H4B8 488 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 THAP9Q9H5L6 903 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 CRTAC1Q9NQ79 661 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 TMEM63CQ9P1W3 806 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 LIMD1Q9UGP4 676 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 COQ4Q9Y3A0 265 aa27.05■■□□□ 1.92
TSPAN4-207ENST00000397411 CD58P19256 250 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 NDST1P52848 882 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 LRMPQ12912 555 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 STX1AQ16623 288 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 DNAJB7Q7Z6W7 309 aaPredicted RBP27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 UNC93AQ86WB7 457 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 ZDHHC14Q8IZN3 488 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 HS6ST3Q8IZP7 471 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 LEMD2Q8NC56 503 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 B3GALNT2Q8NCR0 500 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 ITFG1Q8TB96 612 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 FUBP3Q96I24 572 aaKnown RBP eCLIP27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 MED10Q9BTT4 135 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 BCO2Q9BYV7 579 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 DENND4AQ7Z401 1863 aa27.04■■□□□ 1.92
TSPAN4-207ENST00000397411 P4HA2O15460 535 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 ATP8B3O60423 1300 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 GRIK1P39086 918 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 CCDC142Q17RM4 750 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 ACOT1Q86TX2 421 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 ING5Q8WYH8 240 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 TATDN2Q93075 761 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 FAXDC2Q96IV6 333 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 MYADMQ96S97 322 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 LPIN3Q9BQK8 851 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 NME7Q9Y5B8 376 aa27.03■■□□□ 1.92
TSPAN4-207ENST00000397411 BDNFP23560 247 aa27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 DDR2Q16832 855 aa27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 CFAP221Q4G0U5 840 aa27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 TTC39CQ8N584 583 aa27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 GPR152Q8TDT2 470 aa27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 PSMG2Q969U7 264 aa27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 PCED1BQ96HM7 432 aa27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 AVENQ9NQS1 362 aaPredicted RBP27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 CDH7Q9ULB5 785 aa27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 ZFP37Q9Y6Q3 630 aaPredicted RBP27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 NCOR1O75376 2440 aa27.02■■□□□ 1.92
TSPAN4-207ENST00000397411 PMM2O15305 246 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms