RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ZNF280BQ86YH2 543 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 ZDHHC17Q8IUH5 632 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 IPO4Q8TEX9 1081 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 ZNF653Q96CK0 615 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 ZNF689Q96CS4 500 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 VWCEQ96DN2 955 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 NAPGQ99747 312 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 PACSIN1Q9BY11 444 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 THAP2Q9H0W7 228 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 PARVAQ9NVD7 372 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 TAS2R14Q9NYV8 317 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 HMGXB4Q9UGU5 601 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 DNAI1Q9UI46 699 aa20.16■□□□□ 0.82
TSPAN4-204ENST00000397404 FNDC1Q4ZHG4 1894 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 MICAL2O94851 1124 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 OAZ2O95190 189 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 FGBP02675 491 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 PTPN1P18031 435 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 ABCB4P21439 1286 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 ACADSBP45954 432 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 NOP2P46087 812 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 GABRB2P47870 512 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 TSPY1Q01534 308 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 YWHAHQ04917 246 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 BST2Q10589 180 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 TCTN1Q2MV58 587 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 OVOS1Q6IE37 1185 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 SYT10Q6XYQ8 523 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 SLC35G2Q8TBE7 412 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 PHOSPHO2Q8TCD6 241 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 CTTNBP2NLQ9P2B4 639 aa20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 CNOT8Q9UFF9 292 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-204ENST00000397404 M0QYV0 167 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 NRP1O14786 923 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 PRLRP16471 622 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 ITGB8P26012 769 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 GPD2P43304 727 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 ZNF268Q14587 947 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 PKDCCQ504Y2 493 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 C11orf63Q6NUN7 778 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 CD300LGQ6UXG3 332 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 CPA5Q8WXQ8 436 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 HSFY1Q96LI6 401 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 SYT15Q9BQS2 421 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 ZSWIM1Q9BR11 485 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 PAAF1Q9BRP4 392 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 UBXN6Q9BZV1 441 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 DUSP10Q9Y6W6 482 aa20.14■□□□□ 0.81
TSPAN4-204ENST00000397404 GALTP07902 379 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 LAG3P18627 525 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 PPP1R26Q5T8A7 1209 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 PLEKHA7Q6IQ23 1121 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 GPR65Q8IYL9 337 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 SLC35F6Q8N357 371 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 TMEM130Q8N3G9 435 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 C1orf131Q8NDD1 294 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 TPCN2Q8NHX9 752 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 MYCBPAPQ8TBZ2 947 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 C18orf8Q96DM3 657 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 RC3H2Q9HBD1 1191 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 AAASQ9NRG9 546 aa20.13■□□□□ 0.81
TSPAN4-204ENST00000397404 H7C4K7 107 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 LMO2P25791 158 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 PPM1AP35813 382 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 SCNN1AP37088 669 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 C4orf50Q6ZRC1 276 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 SLFN11Q7Z7L1 901 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 PASD1Q8IV76 773 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 DCP1BQ8IZD4 617 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 C3orf20Q8ND61 904 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 SLC9A7Q96T83 725 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 SYNCQ9H7C4 482 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 TRIM10Q9UDY6 481 aa20.12■□□□□ 0.81
TSPAN4-204ENST00000397404 OR6C75A6NL08 312 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 PDGFRBP09619 1106 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 SLC1A1P43005 524 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 RPL34P49207 117 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 PTP4A2Q12974 167 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 PDCLQ13371 301 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 NFE2Q16621 373 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 GOLGA7BQ2TAP0 167 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 INTS6LQ5JSJ4 861 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 FAM171BQ6P995 826 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 OSTM1Q86WC4 334 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 ZNF564Q8TBZ8 553 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 DUSP16Q9BY84 665 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 PNPLA8Q9NP80 782 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 DNAJB4Q9UDY4 337 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 COL4A6Q14031 1691 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 A0A0U1RQJ8 604 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 XPO1O14980 1071 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 MOCS3O95396 460 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 FGFR3P22607 806 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 BRCC3P46736 316 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 PLA2G4AP47712 749 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 SLC11A1P49279 550 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 BCAR1P56945 870 aa20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 PAPD7Q5XG87 772 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-204ENST00000397404 ZNF280DQ6N043 979 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms