RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CFAP73A6NFT4 308 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 PCDH8O95206 1070 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 PSMB9P28065 219 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 GRK3P35626 688 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 MAGEA10P43363 369 aaPredicted RBP12.82□□□□□ -0.36
SMU1-201ENST00000397149 SMTNL2Q2TAL5 461 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 MROH9Q5TGP6 573 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 ARMC3Q5W041 872 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 CDC73Q6P1J9 531 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 PRUNE1Q86TP1 453 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 TPD52L3Q96J77 140 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 FAR2Q96K12 515 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 C2orf40Q9H1Z8 148 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 TRMT6Q9UJA5 497 aaKnown RBP12.82□□□□□ -0.36
SMU1-201ENST00000397149 AGO2Q9UKV8 859 aaKnown RBP12.82□□□□□ -0.36
SMU1-201ENST00000397149 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
SMU1-201ENST00000397149 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 TIAM1Q13009 1591 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 OR6B1O95007 311 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 IL12RB1P42701 662 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 ANXA11P50995 505 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 AP1S2P56377 157 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 PAN2Q504Q3 1202 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 SRLQ86TD4 932 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 HPS6Q86YV9 775 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CCDC185Q8N715 623 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 MS4A14Q96JA4 679 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CNOT7Q9UIV1 285 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 FAM25EA8MYX2 175 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CNOT3O75175 753 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 AKR1D1P51857 326 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 DUOXA2Q1HG44 320 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 NDUFAF6Q330K2 333 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 C12orf60Q5U649 245 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CACHD1Q5VU97 1274 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 STK33Q9BYT3 514 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 RANBP17Q9H2T7 1088 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 TMEM260Q9NX78 707 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 TDRKHQ9Y2W6 561 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 TNFRSF21O75509 655 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 ASS1P00966 412 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 C6orf222P0C671 652 aaPredicted RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 ARHGAP15Q53QZ3 475 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 DCAF6Q58WW2 860 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 SENP7Q9BQF6 1050 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 NRDE2Q9H7Z3 1164 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CYP4F12Q9HCS2 524 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CTNNAL1Q9UBT7 734 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 NAGPAQ9UK23 515 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 EMSYQ7Z589 1322 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 PSMA4P25789 261 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 IL5RAQ01344 420 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 SRSF11Q05519 484 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 PTK7Q13308 1070 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CHI3L2Q15782 390 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 HAUS6Q7Z4H7 955 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 ZNF671Q8TAW3 534 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CMTM5Q96DZ9 223 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CAMKK2Q96RR4 588 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 LRCH1Q9Y2L9 728 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 RIMS2Q9UQ26 1411 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 SH3BGRLO75368 114 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 ZNF284Q2VY69 593 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 PI16Q6UXB8 463 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 MCEEQ96PE7 176 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 WNT8AQ9H1J5 351 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 TDRD3Q9H7E2 651 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 RNF146Q9NTX7 359 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 ABI2Q9NYB9 513 aaPredicted RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 LEMD3Q9Y2U8 911 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 PCDHB7Q9Y5E2 793 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 KIF1CO43896 1103 aaKnown RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 MFAP3LO75121 409 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 PDGFRAP16234 1089 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 ZNF200P98182 395 aaPredicted RBP12.81□□□□□ -0.36
SMU1-201ENST00000397149 DNAL1Q4LDG9 190 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 CARD14Q9BXL6 1004 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 RHBGQ9H310 441 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
SMU1-201ENST00000397149 A0A1W2PRG6 482 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 SUPT7LO94864 414 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 ALOX12P18054 663 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 PSMD7P51665 324 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 C1DQ13901 141 aaKnown RBP12.8□□□□□ -0.36
SMU1-201ENST00000397149 SAPCD2Q86UD0 394 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 TAF1DQ9H5J8 278 aaPredicted RBP12.8□□□□□ -0.36
SMU1-201ENST00000397149 ENTPD7Q9NQZ7 604 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 TLR7Q9NYK1 1049 aaKnown RBP12.8□□□□□ -0.36
SMU1-201ENST00000397149 MYO3BQ8WXR4 1341 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 CHN1P15882 459 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 SCP2P22307 547 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 ACOT2P49753 483 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
SMU1-201ENST00000397149 STXBP1P61764 594 aaKnown RBP12.8□□□□□ -0.36
SMU1-201ENST00000397149 FAM20CQ8IXL6 584 aa12.8□□□□□ -0.36
SMU1-201ENST00000397149 MICALL2Q8IY33 904 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms