RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TMEM169Q96HH4 297 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 MYRFLQ96LU7 910 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 FAM193BQ96PV7 902 aaPredicted RBP11.32□□□□□ -0.6
NUP98-205ENST00000397007 PRDM12Q9H4Q4 367 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 PNPLA8Q9NP80 782 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 TCRBV5S1A1TA0A578 114 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 CHRNB2P17787 502 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 WDR72Q3MJ13 1102 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 PRSS36Q5K4E3 855 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 SYCE2Q6PIF2 218 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 BNIPLQ7Z465 357 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 WDTC1Q8N5D0 677 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 TFAP2BQ92481 460 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 DNAJC7Q99615 494 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 XPO4Q9C0E2 1151 aaKnown RBP11.32□□□□□ -0.6
NUP98-205ENST00000397007 AFF4Q9UHB7 1163 aaKnown RBP11.32□□□□□ -0.6
NUP98-205ENST00000397007 H7C4K7 107 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 MOSPD3O75425 235 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 MICAL2O94851 1124 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 WEE1P30291 646 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 YWHAHQ04917 246 aaPredicted RBP11.32□□□□□ -0.6
NUP98-205ENST00000397007 ZNF667Q5HYK9 610 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 AUTS2Q8WXX7 1259 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 VPS16Q9H269 839 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 CAPN11Q9UMQ6 739 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 SNX9Q9Y5X1 595 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 USP3Q9Y6I4 520 aa11.32□□□□□ -0.6
NUP98-205ENST00000397007 ATP8B3O60423 1300 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 ZDHHC11BP0C7U3 371 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 HAPLN1P10915 354 aaPredicted RBP11.31□□□□□ -0.6
NUP98-205ENST00000397007 GTF2F1P35269 517 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUP98-205ENST00000397007 NDST1P52848 882 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 KRT17Q04695 432 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 OVOS1Q6IE37 1185 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 CYP26C1Q6V0L0 522 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 TMEM139Q8IV31 216 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 ZNF276Q8N554 614 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 B3GALNT2Q8NCR0 500 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
NUP98-205ENST00000397007 FAM212AQ96EL1 285 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 MYBPHLA2RUH7 354 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 ATP2C2O75185 946 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 HMGA1P17096 107 aaKnown RBP11.31□□□□□ -0.6
NUP98-205ENST00000397007 PTP4A2Q12974 167 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 WDR59Q6PJI9 974 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 TRMT2BQ96GJ1 504 aaKnown RBP11.31□□□□□ -0.6
NUP98-205ENST00000397007 PCED1BQ96HM7 432 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 LPIN3Q9BQK8 851 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 MRPL17Q9NRX2 175 aaKnown RBP11.31□□□□□ -0.6
NUP98-205ENST00000397007 DDX43Q9NXZ2 648 aaKnown RBP11.31□□□□□ -0.6
NUP98-205ENST00000397007 O00370 1275 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 LINC01565O15544 149 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 TADA3O75528 432 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 SYCP1Q15431 976 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 ZNF280DQ6N043 979 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 LCLAT1Q6UWP7 414 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 DRC7Q8IY82 874 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 IQCDQ96DY2 449 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 C8orf48Q96LL4 319 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 CYTH4Q9UIA0 394 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUP98-205ENST00000397007 HCFC2Q9Y5Z7 792 aa11.31□□□□□ -0.6
NUP98-205ENST00000397007 CYP1A1P04798 512 aaPredicted RBP11.3□□□□□ -0.6
NUP98-205ENST00000397007 MTIF2P46199 727 aaKnown RBP11.3□□□□□ -0.6
NUP98-205ENST00000397007 HSP90AA4PQ58FG1 418 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 TTC30AQ86WT1 665 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 PDLIM2Q96JY6 352 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 NT5C1BQ96P26 610 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 PTPN1P18031 435 aaKnown RBP11.3□□□□□ -0.6
NUP98-205ENST00000397007 GABRB2P47870 512 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 CDK17Q00537 523 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 TTC9BQ8N6N2 239 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 SMRP1Q8NCR6 262 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 SLC35F5Q8WV83 523 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 CERS4Q9HA82 394 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 IL21Q9HBE4 155 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 ZDHHC7Q9NXF8 308 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 TIMM13Q9Y5L4 95 aaPredicted RBP11.3□□□□□ -0.6
NUP98-205ENST00000397007 FOXN3O00409 490 aaPredicted RBP11.3□□□□□ -0.6
NUP98-205ENST00000397007 CFHP08603 1231 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 ZNF75DP51815 510 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 DLX2Q07687 328 aaPredicted RBP11.3□□□□□ -0.6
NUP98-205ENST00000397007 ANKRD54Q6NXT1 300 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 EPS8L1Q8TE68 723 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 RIN2Q8WYP3 895 aaPredicted RBP11.3□□□□□ -0.6
NUP98-205ENST00000397007 KCTD13Q8WZ19 329 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 SMOQ99835 787 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 LHX5Q9H2C1 402 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 COMMD8Q9NX08 183 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 KIAA1257Q9ULG3 409 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 CDY1Q9Y6F8 540 aa11.3□□□□□ -0.6
NUP98-205ENST00000397007 BEST1O76090 585 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 CXCL14O95715 111 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 PLA2G4AP47712 749 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 PTPROQ16827 1216 aa11.29□□□□□ -0.6
NUP98-205ENST00000397007 SYT15Q9BQS2 421 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms