RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ZNF177Q13360 481 aaPredicted RBP16.31■□□□□ 0.2
GNE-202ENST00000396594 IQSEC1Q6DN90 963 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 EXD1Q8NHP7 514 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 TMEM39BQ9GZU3 492 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 MUC3BQ9H195 1237 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 TBC1D13Q9NVG8 400 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 CCDC78A2IDD5 438 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 C2orf81A6NN90 581 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 ZNF263O14978 683 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 DTNBO60941 627 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 EEF1DP29692 281 aaKnown RBP16.31■□□□□ 0.2
GNE-202ENST00000396594 CCZ1BP86790 482 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 CCZ1P86791 482 aaPredicted RBP16.31■□□□□ 0.2
GNE-202ENST00000396594 DTX3LQ8TDB6 740 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 SLC25A13Q9UJS0 675 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 TMCO1Q9UM00 188 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 F5H5T6 163 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 CYP2B6P20813 491 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 JAMLQ86YT9 394 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 TMEM86AQ8N2M4 240 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 MKL1Q969V6 931 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 CINPQ9BW66 212 aaPredicted RBP16.3■□□□□ 0.2
GNE-202ENST00000396594 KIF17Q9P2E2 1029 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 DCDC2Q9UHG0 476 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 POU5F1BQ06416 359 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 PPIL2Q13356 520 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 CAPRIN1Q14444 709 aaKnown RBP16.3■□□□□ 0.2
GNE-202ENST00000396594 HIC1Q14526 733 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 CYP4A22Q5TCH4 519 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 NAF1Q96HR8 494 aaKnown RBP16.3■□□□□ 0.2
GNE-202ENST00000396594 TMEM134Q9H6X4 195 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 TRAF3IP3Q9Y228 551 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 HNRNPCL2B2RXH8 293 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 GLRA3O75311 464 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 RTN3O95197 1032 aaPredicted RBP16.3■□□□□ 0.2
GNE-202ENST00000396594 GRIN1Q05586 938 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 FAM83EQ2M2I3 478 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 E4F1Q66K89 784 aaPredicted RBP16.3■□□□□ 0.2
GNE-202ENST00000396594 CENPPQ6IPU0 288 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 CCNI2Q6ZMN8 369 aaPredicted RBP16.3■□□□□ 0.2
GNE-202ENST00000396594 RRM2BQ7LG56 351 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 TC2NQ8N9U0 490 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 SLC5A5Q92911 643 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 EXT2Q93063 718 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 ING2Q9H160 280 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 EPN3Q9H201 632 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 ABHD16BQ9H3Z7 469 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 FIS1Q9Y3D6 152 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 SPACA6W5XKT8 324 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 GCNT1Q02742 428 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 BST2Q10589 180 aaKnown RBP16.3■□□□□ 0.2
GNE-202ENST00000396594 CHSY1Q86X52 802 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 ACTRT1Q8TDG2 376 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 MRPL1Q9BYD6 325 aaKnown RBP16.3■□□□□ 0.2
GNE-202ENST00000396594 RAB6BQ9NRW1 208 aa16.3■□□□□ 0.2
GNE-202ENST00000396594 URODP06132 367 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 MDH1P40925 334 aaKnown RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 GRAMD1BQ3KR37 738 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 METTL3Q86U44 580 aaKnown RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 EIF1ADQ8N9N8 165 aaKnown RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 DCLK3Q9C098 648 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 MOSPD1Q9UJG1 213 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 NFASCO94856 1347 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 HACD1B0YJ81 288 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 BNIP3LO60238 219 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 RNASEH1O60930 286 aaKnown RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 PPP1R37O75864 691 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 ZNF211Q13398 564 aaPredicted RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 AGAP9Q5VTM2 703 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 IL31Q6EBC2 164 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 AGBL1Q96MI9 1066 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 GAKO14976 1311 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 COILP38432 576 aaPredicted RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 SERPINB10P48595 397 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 OOSP2Q86WS3 158 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 SLC13A5Q86YT5 568 aaPredicted RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 C1orf54Q8WWF1 131 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 PRKD2Q9BZL6 878 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 KRCC1Q9NPI7 259 aaPredicted RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 SPATS2LQ9NUQ6 558 aaKnown RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 POLLQ9UGP5 575 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 CDYLQ9Y232 598 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 AP3M1Q9Y2T2 418 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 SYCE1LA8MT33 242 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 FAM107AO95990 144 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 AKR1A1P14550 325 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 EEF1B2P24534 225 aaKnown RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 PTGER2P43116 358 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 DYNC1I2Q13409 638 aaKnown RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 TERF2Q15554 542 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 ZNF507Q8TCN5 953 aa16.29■□□□□ 0.2
GNE-202ENST00000396594 POP5Q969H6 163 aaKnown RBP16.29■□□□□ 0.2
GNE-202ENST00000396594 WDR91A4D1P6 747 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 DIAPH2O60879 1101 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 PLA2G4FQ68DD2 849 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 ICA1LQ8NDH6 482 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 MCCC1Q96RQ3 725 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms