RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 ZNF653Q96CK0 615 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 ZNF689Q96CS4 500 aaPredicted RBP16.35■□□□□ 0.21
VAMP1-202ENST00000396308 C16orf45Q96MC5 204 aaPredicted RBP16.35■□□□□ 0.21
VAMP1-202ENST00000396308 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.35■□□□□ 0.21
VAMP1-202ENST00000396308 MED10Q9BTT4 135 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 OXCT2Q9BYC2 517 aaPredicted RBP16.35■□□□□ 0.21
VAMP1-202ENST00000396308 ISCUQ9H1K1 167 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 LHX5Q9H2C1 402 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 SYNCQ9H7C4 482 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 FAM49BQ9NUQ9 324 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 MYO1AQ9UBC5 1043 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 STK39Q9UEW8 545 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 STRIP2Q9ULQ0 834 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 NENFQ9UMX5 172 aa16.35■□□□□ 0.21
VAMP1-202ENST00000396308 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 NLRC5Q86WI3 1866 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 H7C4K7 107 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 B4GALT3O60512 393 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 MICAL2O94851 1124 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 CYP1A1P04798 512 aaPredicted RBP16.34■□□□□ 0.21
VAMP1-202ENST00000396308 ITGB1P05556 798 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 SETSIPP0DME0 302 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 PTPN1P18031 435 aaKnown RBP16.34■□□□□ 0.21
VAMP1-202ENST00000396308 ABCB4P21439 1286 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 BCAT1P54687 386 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 GALCP54803 685 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 ZNF280DQ6N043 979 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 LCLAT1Q6UWP7 414 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 OSTM1Q86WC4 334 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 RHOT2Q8IXI1 618 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 FIBCD1Q8N539 461 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 TFAP2BQ92481 460 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 CYFIP2Q96F07 1278 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 TMEM169Q96HH4 297 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 PCDHB18PQ96TA0 734 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 ACBD6Q9BR61 282 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 TSPAN16Q9UKR8 245 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 INSL6Q9Y581 213 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 PCDHB12Q9Y5F1 795 aa16.34■□□□□ 0.21
VAMP1-202ENST00000396308 TIMM13Q9Y5L4 95 aaPredicted RBP16.34■□□□□ 0.21
VAMP1-202ENST00000396308 A0A0A6YYK5 440 aaPredicted RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 MACROD2A1Z1Q3 448 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 BTNL10A8MVZ5 291 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 GJB5O95377 273 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 UNGP13051 313 aaPredicted RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 ATP2A2P16615 1042 aaKnown RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 ACAT1P24752 427 aaKnown RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 CDH5P33151 784 aaPredicted RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 NOP2P46087 812 aaKnown RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 GPC5P78333 572 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 C1QBPQ07021 282 aaKnown RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 MDH1BQ5I0G3 518 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 FAM171A1Q5VUB5 890 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 KCNT2Q6UVM3 1135 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 ERICH1Q86X53 443 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 CEP57Q86XR8 500 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 PALB2Q86YC2 1186 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 DCP1BQ8IZD4 617 aaKnown RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 RNF10Q8N5U6 811 aaKnown RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 C1orf131Q8NDD1 294 aaKnown RBP16.33■□□□□ 0.2
VAMP1-202ENST00000396308 CPA5Q8WXQ8 436 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 RFFLQ8WZ73 363 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 VCPIP1Q96JH7 1222 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 ADAM22Q9P0K1 906 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 SCINQ9Y6U3 715 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 NCANO14594 1321 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 VWA8A3KMH1 1905 aa16.33■□□□□ 0.2
VAMP1-202ENST00000396308 LMO2P25791 158 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 ADORA2BP29275 332 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 TKTP29401 623 aaKnown RBP16.32■□□□□ 0.2
VAMP1-202ENST00000396308 SSTR3P32745 418 aaPredicted RBP16.32■□□□□ 0.2
VAMP1-202ENST00000396308 BST2Q10589 180 aaKnown RBP16.32■□□□□ 0.2
VAMP1-202ENST00000396308 INTS6LQ5JSJ4 861 aaKnown RBP16.32■□□□□ 0.2
VAMP1-202ENST00000396308 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
VAMP1-202ENST00000396308 KIAA1841Q6NSI8 718 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 DENND1BQ6P3S1 775 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 CD300LGQ6UXG3 332 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 C4orf50Q6ZRC1 276 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 ANKS3Q6ZW76 656 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 C16orf59Q7L2K0 433 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 PHF13Q86YI8 300 aaPredicted RBP16.32■□□□□ 0.2
VAMP1-202ENST00000396308 HERC6Q8IVU3 1022 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 COLGALT1Q8NBJ5 622 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 OLIG1Q8TAK6 271 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 C11orf70Q9BRQ4 267 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 PACSIN1Q9BY11 444 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 CWH43Q9H720 699 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 RC3H2Q9HBD1 1191 aaKnown RBP16.32■□□□□ 0.2
VAMP1-202ENST00000396308 MRPL47Q9HD33 250 aaKnown RBP16.32■□□□□ 0.2
VAMP1-202ENST00000396308 MARCH5Q9NX47 278 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 TAS2R14Q9NYV8 317 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 SPG21Q9NZD8 308 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 CTTNBP2NLQ9P2B4 639 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 GTF3C4Q9UKN8 822 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 RWDD3Q9Y3V2 267 aa16.32■□□□□ 0.2
VAMP1-202ENST00000396308 OR6C75A6NL08 312 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 F8W810 466 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 TLL1O43897 1013 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms