RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MGAT3Q09327 533 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 CCDC38Q502W7 563 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ANKRD20A2Q5SQ80 823 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ANKRD20A1Q5TYW2 823 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ANKRD20A3Q5VUR7 823 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 GADL1Q6ZQY3 521 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 MRPL10Q7Z7H8 261 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 ARHGEF19Q8IW93 802 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ZBTB8OSQ8IWT0 167 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 USP38Q8NB14 1042 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 KLHL23Q8NBE8 558 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 OR2W6PQ8NHA6 318 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 PSMB7Q99436 277 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 NAP1L3Q99457 506 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 AZI2Q9H6S1 392 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 BCAS3Q9H6U6 928 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 PRKAG2Q9UGJ0 569 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 SEPT9Q9UHD8 586 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 CCL15-CCL14A0A0B4J2E2 113 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 FAM187AA6NFU0 413 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 DCDC2CA8MYV0 355 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 PDLIM1O00151 329 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 OAS1P00973 400 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 CYBAP13498 195 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 LRPAP1P30533 357 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 DNAJA1P31689 397 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 ASPAP45381 313 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 NCALDP61601 193 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 GPC5P78333 572 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 GFPT1Q06210 699 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 MTMR3Q13615 1198 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 CUL2Q13617 745 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ACVR2BQ13705 512 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 LBRQ14739 615 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 CCL15Q16663 113 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 DGKDQ16760 1214 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 EAPPQ56P03 285 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 FAM102BQ5T8I3 360 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ARHGAP17Q68EM7 881 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 TRPM8Q7Z2W7 1104 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 TBC1D1Q86TI0 1168 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 SAPCD2Q86UD0 394 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 CBWD2Q8IUF1 395 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ATL2Q8NHH9 583 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ATXN2LQ8WWM7 1075 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 EZH1Q92800 747 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 DDX27Q96GQ7 796 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 KRT12Q99456 494 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 TSC22D3Q99576 134 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 PAIP2Q9BPZ3 127 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 TSEN34Q9BSV6 310 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 ARHGEF3Q9NR81 526 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 LRRC42Q9Y546 428 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 TLDC2A0PJX2 215 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 DPPA5A6NC42 116 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 K7ERI5 159 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 SART1O43290 800 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 CHMP2AO43633 222 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 DUSP11O75319 330 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 ENDOD1O94919 500 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 VIMP08670 466 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 GNAT1P11488 350 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 SMPD1P17405 629 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 CTCFP49711 727 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 SCNN1BP51168 640 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 MAGOHP61326 146 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 KCNJ2P63252 427 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 LMNB2Q03252 620 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 LAMB3Q13751 1172 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 DHX34Q14147 1143 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 RASA2Q15283 850 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 SIX1Q15475 284 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 HSDL1Q3SXM5 330 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ASRGL1Q7L266 308 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 UNC93AQ86WB7 457 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ERICH1Q86X53 443 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ZDHHC17Q8IUH5 632 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 DEPTORQ8TB45 409 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 PRPF31Q8WWY3 499 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 MAGOHBQ96A72 148 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 UCN2Q96RP3 112 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 PHOX2BQ99453 314 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.67□□□□□ -1.51e-8■■■□□ 15.9
VPS41-203ENST00000395969 OSBPL1AQ9BXW6 950 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 FOXP3Q9BZS1 431 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 PDZD7Q9H5P4 517 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 LRRC19Q9H756 370 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 ASNSD1Q9NWL6 643 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 NOVA2Q9UNW9 492 aaKnown RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 A0A1B0GVG6 124 aa5.66□□□□□ -1.5
VPS41-203ENST00000395969 FSCN2O14926 492 aa5.66□□□□□ -1.5
VPS41-203ENST00000395969 CA12O43570 354 aa5.66□□□□□ -1.5
VPS41-203ENST00000395969 AKR1B10O60218 316 aa5.66□□□□□ -1.5
VPS41-203ENST00000395969 RNF8O76064 485 aa5.66□□□□□ -1.5
VPS41-203ENST00000395969 COL6A1P12109 1028 aa5.66□□□□□ -1.5
VPS41-203ENST00000395969 ATP2A2P16615 1042 aaKnown RBP5.66□□□□□ -1.5
VPS41-203ENST00000395969 GNAZP19086 355 aa5.66□□□□□ -1.5
VPS41-203ENST00000395969 MMP8P22894 467 aa5.66□□□□□ -1.5
VPS41-203ENST00000395969 RGS2P41220 211 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms