RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 KCNT1Q5JUK3 1230 aa9.74□□□□□ -0.85
CDRT1-203ENST00000395667 CENPUQ71F23 418 aa9.74□□□□□ -0.85
CDRT1-203ENST00000395667 PARP9Q8IXQ6 854 aa9.74□□□□□ -0.85
CDRT1-203ENST00000395667 DHX37Q8IY37 1157 aaKnown RBP9.74□□□□□ -0.85
CDRT1-203ENST00000395667 RIBC1Q8N443 379 aaPredicted RBP9.74□□□□□ -0.85
CDRT1-203ENST00000395667 RPF1Q9H9Y2 349 aaKnown RBP9.74□□□□□ -0.85
CDRT1-203ENST00000395667 ACKR2O00590 384 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 SPAG7O75391 227 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 GSTA1P08263 222 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 CXCL8P10145 99 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 RDXP35241 583 aaKnown RBP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 PSMC4P43686 418 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 XRCC4Q13426 336 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 SNCBQ16143 134 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 PPP1R15BQ5SWA1 713 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 EEF1DP3Q658K8 133 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 SPATA21Q7Z572 469 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 CCDC63Q8NA47 563 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 OTUD5Q96G74 571 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 XYLT2Q9H1B5 865 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 PCDH9Q9HC56 1237 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 SAE1Q9UBE0 346 aaPredicted RBP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 TJP2Q9UDY2 1190 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 FAM47DPA6NHR8 397 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 ABLIM1O14639 778 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 ITGAVP06756 1048 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 KRT7P08729 469 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 CDH5P33151 784 aaPredicted RBP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 CLCN3P51790 818 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 CDH8P55286 799 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 IL9RQ01113 521 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 PDIA2Q13087 525 aaKnown RBP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 OASLQ15646 514 aaKnown RBP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 CELF3Q5SZQ8 465 aaKnown RBP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 TSHZ1Q6ZSZ6 1077 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 DPH6Q7L8W6 267 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 TAB3Q8N5C8 712 aaPredicted RBP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 NIPA2Q8N8Q9 360 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 JOSD2Q8TAC2 188 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 NKD2Q969F2 451 aaPredicted RBP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 ZBTB10Q96DT7 871 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 MAGEB18Q96M61 343 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 R3HDMLQ9H3Y0 253 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 CD248Q9HCU0 757 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 SLC12A4Q9UP95 1085 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 ACTL7BQ9Y614 415 aa9.73□□□□□ -0.85
CDRT1-203ENST00000395667 BRCA1P38398 1863 aaKnown RBP9.73□□□□□ -0.85
CDRT1-203ENST00000395667 SIGLEC16A6NMB1 481 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 ZBTB42B2RXF5 422 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 NDC80O14777 642 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 IRF6O14896 467 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 HGSO14964 777 aaPredicted RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 B4GALT4O60513 344 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 CST8O60676 142 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 UBOX5O94941 541 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 PTPN7P35236 360 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 IGBP1P78318 339 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 OTUD4Q01804 1114 aaKnown RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 MKRN3Q13064 507 aaKnown RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 NR1H3Q13133 447 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 EFCAB12Q6NXP0 572 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 FBXO16Q8IX29 292 aaPredicted RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 EMC1Q8N766 993 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 ACTL9Q8TC94 416 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 RSAD2Q8WXG1 361 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 C10orf88Q9H8K7 445 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 ELP3Q9H9T3 547 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 PCSK1NQ9UHG2 260 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 SHOC2Q9UQ13 582 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 ARL2BPQ9Y2Y0 163 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 IGKV6-21A0A0C4DH24 114 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 CHUKO15111 745 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 LRCH4O75427 683 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 OAS1P00973 400 aaKnown RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 KCTD2Q14681 263 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 HIF1AQ16665 826 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 TMEM63BQ5T3F8 832 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 RNASEH2BQ5TBB1 312 aaKnown RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 FAM47EQ6ZV65 393 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 PLPPR4Q7Z2D5 763 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 POLNQ7Z5Q5 900 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 TBC1D1Q86TI0 1168 aaPredicted RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 ANKMY2Q8IV38 441 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 TMEM192Q8IY95 271 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 MAML1Q92585 1016 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 COPS5Q92905 334 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 PLCD4Q9BRC7 762 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 ASCC2Q9H1I8 757 aaPredicted RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 CDT1Q9H211 546 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 TRABDQ9H4I3 376 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 METTL5Q9NRN9 209 aaKnown RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 EVPLQ92817 2033 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 LGR5O75473 907 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 CSDE1O75534 798 aaKnown RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 NFICP08651 508 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 PROZP22891 400 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 IL1R2P27930 398 aa9.72□□□□□ -0.85
CDRT1-203ENST00000395667 CTCFP49711 727 aaPredicted RBP9.72□□□□□ -0.85
CDRT1-203ENST00000395667 TRABD2AQ86V40 505 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms