RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CTTNBP2NLQ9P2B4 639 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 C2CD2Q9Y426 696 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 FNDC1Q4ZHG4 1894 aaPredicted RBP16.05■□□□□ 0.16
SCAF11-204ENST00000395454 CHD7Q9P2D1 2997 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 PGRMC1O00264 195 aaKnown RBP16.05■□□□□ 0.16
SCAF11-204ENST00000395454 GJB5O95377 273 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 KCNE1P15382 129 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 ASPAP45381 313 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 NOMO3P69849 1222 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 RNASELQ05823 741 aaKnown RBP16.05■□□□□ 0.16
SCAF11-204ENST00000395454 TMEM270Q6UE05 265 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 MON1BQ7L1V2 547 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 PHF13Q86YI8 300 aaPredicted RBP16.05■□□□□ 0.16
SCAF11-204ENST00000395454 CASD1Q96PB1 797 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 BCO2Q9BYV7 579 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 FAM124BQ9H5Z6 455 aaPredicted RBP16.05■□□□□ 0.16
SCAF11-204ENST00000395454 SIX4Q9UIU6 781 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 PCDHB4Q9Y5E5 795 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
SCAF11-204ENST00000395454 SEC31AO94979 1220 aaKnown RBP16.04■□□□□ 0.16
SCAF11-204ENST00000395454 STAU1O95793 577 aaKnown RBP16.04■□□□□ 0.16
SCAF11-204ENST00000395454 GNA15P30679 374 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 RASIP1Q5U651 963 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 DCAF12L1Q5VU92 463 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 MCOLN2Q8IZK6 566 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 ZNF564Q8TBZ8 553 aaPredicted RBP16.04■□□□□ 0.16
SCAF11-204ENST00000395454 PHOSPHO2Q8TCD6 241 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 C18orf25Q96B23 403 aaPredicted RBP16.04■□□□□ 0.16
SCAF11-204ENST00000395454 ZNF653Q96CK0 615 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 TBC1D13Q9NVG8 400 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 KANSL3Q9P2N6 904 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 SASH3O75995 380 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 GRIK3Q13003 919 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 TRPC3Q13507 836 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 CLUL1Q15846 466 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 ZNF699Q32M78 642 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 HERC6Q8IVU3 1022 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 C1orf127Q8N9H9 656 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 FAM193BQ96PV7 902 aaPredicted RBP16.04■□□□□ 0.16
SCAF11-204ENST00000395454 PPP1R10Q96QC0 940 aaKnown RBP16.04■□□□□ 0.16
SCAF11-204ENST00000395454 LRRC1Q9BTT6 524 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 NUP85Q9BW27 656 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 MRPL9Q9BYD2 267 aaKnown RBP16.04■□□□□ 0.16
SCAF11-204ENST00000395454 UBXN6Q9BZV1 441 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 GOLGA2P5Q9HBQ8 144 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 SLC38A7Q9NVC3 462 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 TUBGCP4Q9UGJ1 667 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 UBQLN1Q9UMX0 589 aaKnown RBP16.04■□□□□ 0.16
SCAF11-204ENST00000395454 DERAQ9Y315 318 aa16.04■□□□□ 0.16
SCAF11-204ENST00000395454 CCDC188H7C350 402 aa16.03■□□□□ 0.16
SCAF11-204ENST00000395454 INPPL1O15357 1258 aa16.03■□□□□ 0.16
SCAF11-204ENST00000395454 XPOTO43592 962 aaKnown RBP16.03■□□□□ 0.16
SCAF11-204ENST00000395454 LSM8O95777 96 aaKnown RBP16.03■□□□□ 0.16
SCAF11-204ENST00000395454 ATICP31939 592 aa16.03■□□□□ 0.16
SCAF11-204ENST00000395454 CDH5P33151 784 aaPredicted RBP16.03■□□□□ 0.16
SCAF11-204ENST00000395454 LRRC43Q8N309 656 aa16.03■□□□□ 0.16
SCAF11-204ENST00000395454 TMEM130Q8N3G9 435 aa16.03■□□□□ 0.16
SCAF11-204ENST00000395454 CISHQ9NSE2 258 aa16.03■□□□□ 0.16
SCAF11-204ENST00000395454 STIM2Q9P246 746 aa16.03■□□□□ 0.16
SCAF11-204ENST00000395454 BHMG1C9JSJ3 638 aaPredicted RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 TLL1O43897 1013 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 CEP104O60308 925 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 CTNNA2P26232 953 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 PEX5P50542 639 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 GUCY2FP51841 1108 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 YWHAEP62258 255 aaKnown RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 TNNC1P63316 161 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 SOX4Q06945 474 aaPredicted RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 PTP4A2Q12974 167 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 BTG3Q14201 252 aaPredicted RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 MAP9Q49MG5 647 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 C8orf74Q6P047 294 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 CHRDL2Q6WN34 429 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 CCNI2Q6ZMN8 369 aaPredicted RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 ZNF280BQ86YH2 543 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 BEST2Q8NFU1 509 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 HDAC7Q8WUI4 952 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 ZNF606Q8WXB4 792 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 RSPH1Q8WYR4 309 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 ALG3Q92685 438 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 ZNF689Q96CS4 500 aaPredicted RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 TSPAN18Q96SJ8 248 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 ZSWIM1Q9BR11 485 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 RC3H2Q9HBD1 1191 aaKnown RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 HCSTQ9UBK5 93 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 CACNG4Q9UBN1 327 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 CNOT8Q9UFF9 292 aaKnown RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.16
SCAF11-204ENST00000395454 PCDHGC3Q9UN70 934 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 INSL6Q9Y581 213 aa16.02■□□□□ 0.16
SCAF11-204ENST00000395454 CASTOR2A6NHX0 329 aa16.02■□□□□ 0.15
SCAF11-204ENST00000395454 ATMINO43313 823 aaPredicted RBP16.02■□□□□ 0.15
SCAF11-204ENST00000395454 CALCAP01258 141 aa16.02■□□□□ 0.15
SCAF11-204ENST00000395454 KRT19P08727 400 aa16.02■□□□□ 0.15
SCAF11-204ENST00000395454 CTNNA1P35221 906 aaKnown RBP16.02■□□□□ 0.15
SCAF11-204ENST00000395454 NSFP46459 744 aaKnown RBP16.02■□□□□ 0.15
SCAF11-204ENST00000395454 DNA2P51530 1060 aa16.02■□□□□ 0.15
SCAF11-204ENST00000395454 ZBTB6Q15916 424 aa16.02■□□□□ 0.15
SCAF11-204ENST00000395454 FAM109BQ6ICB4 259 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms