RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 GAS8O95995 478 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 MMP3P08254 477 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 HOXD8P13378 290 aaPredicted RBP14.73□□□□□ -0.05
SNCA-204ENST00000394989 KLRC2P26717 231 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 RDXP35241 583 aaKnown RBP14.73□□□□□ -0.05
SNCA-204ENST00000394989 VPS41P49754 854 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 TNFAIP2Q03169 654 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 ODF2Q5BJF6 829 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 LRRC38Q5VT99 294 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 RCOR2Q8IZ40 523 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 PGM2Q96G03 612 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 PTPN18Q99952 460 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 VRTNQ9H8Y1 702 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 IQCA1LA6NCM1 817 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 PAEPP09466 180 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 POLR2BP30876 1174 aaKnown RBP14.73□□□□□ -0.05
SNCA-204ENST00000394989 YWHAEP62258 255 aaKnown RBP14.73□□□□□ -0.05
SNCA-204ENST00000394989 PIGHQ14442 188 aaPredicted RBP14.73□□□□□ -0.05
SNCA-204ENST00000394989 E2F5Q15329 346 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 GRIK4Q16099 956 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 HOOK3Q86VS8 718 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 ARFGAP2Q8N6H7 521 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 GLIS1Q8NBF1 620 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 HOMER3Q9NSC5 361 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 A0A1B0GUA9 196 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 SMIM23A6NLE4 172 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 GOLGA8SH3BPF8 625 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 KRT1P04264 644 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 PTPN11Q06124 597 aaPredicted RBP14.73□□□□□ -0.05
SNCA-204ENST00000394989 IFT88Q13099 833 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 DUSP28Q4G0W2 176 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 ANKRD23Q86SG2 305 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 DPP9Q86TI2 863 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 PNMA8AQ86V59 439 aaPredicted RBP14.73□□□□□ -0.05
SNCA-204ENST00000394989 DNPEPQ9ULA0 475 aa14.73□□□□□ -0.05
SNCA-204ENST00000394989 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.73□□□□□ -0.05
SNCA-204ENST00000394989 LIASO43766 372 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 ERBB2P04626 1255 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 ATF7P17544 494 aaPredicted RBP14.72□□□□□ -0.05
SNCA-204ENST00000394989 ADCY8P40145 1251 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 GCLCP48506 637 aaPredicted RBP14.72□□□□□ -0.05
SNCA-204ENST00000394989 IFI35P80217 286 aaPredicted RBP14.72□□□□□ -0.05
SNCA-204ENST00000394989 TAP1Q03518 808 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 BYSLQ13895 437 aaKnown RBP14.72□□□□□ -0.05
SNCA-204ENST00000394989 SPOCD1Q6ZMY3 1216 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 XYLT1Q86Y38 959 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 PPP1R13LQ8WUF5 828 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 FAXDC2Q96IV6 333 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 RBM41Q96IZ5 413 aaKnown RBP14.72□□□□□ -0.05
SNCA-204ENST00000394989 TMEM109Q9BVC6 243 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 ADAM7Q9H2U9 754 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 DNAJC17Q9NVM6 304 aaKnown RBP14.72□□□□□ -0.05
SNCA-204ENST00000394989 CITO14578 2027 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 TLDC2A0PJX2 215 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 UNCXA6NJT0 531 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 C3orf70A6NLC5 250 aaPredicted RBP14.72□□□□□ -0.05
SNCA-204ENST00000394989 ATF2P15336 505 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 IL1R2P27930 398 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 SLCO1A2P46721 670 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 SLC25A11Q02978 314 aaKnown RBP14.72□□□□□ -0.05
SNCA-204ENST00000394989 TNFAIP8L3Q5GJ75 292 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 SMYD5Q6GMV2 418 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 NPLOC4Q8TAT6 608 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 TMEM176AQ96HP8 235 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 SCLT1Q96NL6 688 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 SLC24A3Q9HC58 644 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 STRIP2Q9ULQ0 834 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 TRIP11Q15643 1979 aa14.72□□□□□ -0.05
SNCA-204ENST00000394989 hCG_1818297A0A087WSY0 165 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 SIGLEC16A6NMB1 481 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 MED7O43513 233 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 LRCH4O75427 683 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 CHRM1P11229 460 aaPredicted RBP14.71□□□□□ -0.05
SNCA-204ENST00000394989 KRT3P12035 628 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 CDKN2BP42772 138 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 TMEM132DQ14C87 1099 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 TRMT10CQ7L0Y3 403 aaKnown RBP14.71□□□□□ -0.05
SNCA-204ENST00000394989 EMC1Q8N766 993 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 MDM1Q8TC05 714 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 HPDLQ96IR7 371 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 TINF2Q9BSI4 451 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 TRAIPQ9BWF2 469 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 PPANQ9NQ55 473 aaKnown RBP14.71□□□□□ -0.05
SNCA-204ENST00000394989 AGAP1Q9UPQ3 857 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 BRCA2P51587 3418 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 MICAL2O94851 1124 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 ACSL3O95573 720 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 CPP00450 1065 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 ATICP31939 592 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 PSMC4P43686 418 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 ACVR2BQ13705 512 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 MYCBPAPQ8TBZ2 947 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 SETD4Q9NVD3 440 aa14.71□□□□□ -0.05
SNCA-204ENST00000394989 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNCA-204ENST00000394989 RPSAP08865 295 aaKnown RBP14.71□□□□□ -0.06
SNCA-204ENST00000394989 PTPN7P35236 360 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 GPD2P43304 727 aa14.71□□□□□ -0.06
SNCA-204ENST00000394989 GSCP56915 257 aaPredicted RBP14.71□□□□□ -0.06
SNCA-204ENST00000394989 PSMC1P62191 440 aaKnown RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms