RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 KLC1Q07866 573 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 RIPK1Q13546 671 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 PPP2R5DQ14738 602 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 C1orf228Q6PIY5 440 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 GADL1Q6ZQY3 521 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 FBXO36Q8NEA4 188 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 ACTL9Q8TC94 416 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 DNAJC9Q8WXX5 260 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 ZNF317Q96PQ6 595 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 SEPT10Q9P0V9 454 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 SCAF8Q9UPN6 1271 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 CCDC195A0A1B0GUA6 201 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 OPHN1O60890 802 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 UNC5CO95185 931 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 SERPINB6P35237 376 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 ARL4AP40617 200 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 NLRP11P59045 1033 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 RBBP5Q15291 538 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 TRIM4Q9C037 500 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 MYLK2Q9H1R3 596 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 RSAD1Q9HA92 442 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 DONSONQ9NYP3 566 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.24□□□□□ -0.456e-9■□□□□ 11.3
UBE2D3-209ENST00000394804 WRAP73Q9P2S5 460 aaPredicted RBP12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 BCAP29Q9UHQ4 241 aa12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.24□□□□□ -0.45
UBE2D3-209ENST00000394804 CLGNO14967 610 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 NVLO15381 856 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 PLA2G6O60733 806 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 KITP10721 976 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 SDC4P31431 198 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 FAM71DQ8N9W8 422 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 NSL1Q96IY1 281 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 MFSD14AQ96MC6 490 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 MCM8Q9UJA3 840 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 AKT3Q9Y243 479 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 STARD13Q9Y3M8 1113 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 MGRN1O60291 552 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 GJB6O95452 261 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 SUPT20HL2P0C7V6 817 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 HSD17B4P51659 736 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 MAMLD1Q13495 774 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 UGCGQ16739 394 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 NME8Q8N427 588 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 ZNF668Q96K58 619 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 ANKRD27Q96NW4 1050 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 HEY2Q9UBP5 337 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 IVNS1ABPQ9Y6Y0 642 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 KCNN4O15554 427 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 ZSCAN5DPP0CG00 497 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 OSBPP22059 807 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 TAF1BQ53T94 588 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 SYCP2LQ5T4T6 812 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 C1orf146Q5VVC0 180 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 AGBL3Q8NEM8 1001 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 ZC3H7BQ9UGR2 993 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 R3HDM2Q9Y2K5 976 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 LAMB1P07942 1786 aa12.23□□□□□ -0.45
UBE2D3-209ENST00000394804 ADGRA3Q8IWK6 1321 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 MRPS35P82673 323 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 POU5F1Q01860 360 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 ZACNQ401N2 412 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 FAM47CQ5HY64 1035 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 DAB2IPQ5VWQ8 1189 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 ZNF280CQ8ND82 737 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 DTX3LQ8TDB6 740 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 FAM149B1Q96BN6 582 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 NAF1Q96HR8 494 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 GLIS2Q9BZE0 524 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 MTMR12Q9C0I1 747 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 TM9SF1O15321 606 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 LIASO43766 372 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 APRTP07741 180 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 SNRPAP09012 282 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 PTPN4P29074 926 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 NOMO3P69849 1222 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 KCTD2Q14681 263 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 KCNT1Q5JUK3 1230 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 MTDHQ86UE4 582 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 C7orf31Q8N865 590 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 FAM111AQ96PZ2 611 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 TMEM237Q96Q45 408 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 P2RX7Q99572 595 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 CCDC134Q9H6E4 229 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 CISHQ9NSE2 258 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 PAK5Q9P286 719 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 USP20Q9Y2K6 914 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 GH1P01241 217 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 KRT16P08779 473 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 PDGFRAP16234 1089 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 STIP1P31948 543 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 SKIV2L2P42285 1042 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 TAS2R40P59535 323 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 TNFAIP2Q03169 654 aa12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 MXD4Q14582 209 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-209ENST00000394804 GPR162Q16538 588 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 215.6 ms