RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 ATXN2LQ8WWM7 1075 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 KATNBL1Q9H079 304 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 FAM124BQ9H5Z6 455 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 CCDC134Q9H6E4 229 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 KLHL11Q9NVR0 708 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 SMIM23A6NLE4 172 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 ITGB3P05106 788 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 CD19P15391 556 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 SLCO1A2P46721 670 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 RAP1GAPP47736 663 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 ZNF268Q14587 947 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 OASLQ15646 514 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 KYNUQ16719 465 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 SLC10A6Q3KNW5 377 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 GJC2Q5T442 439 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 IZUMO3Q5VZ72 239 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 CEP128Q6ZU80 1094 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 EXOC3L1Q86VI1 746 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 SUGP1Q8IWZ8 645 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 ALLCQ8N6M5 410 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 NKD2Q969F2 451 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 C16orf70Q9BSU1 422 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 NINJ2Q9NZG7 142 aa16.18■□□□□ 0.18
UBE2D3-207ENST00000394801 UNCXA6NJT0 531 aa16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 C3orf70A6NLC5 250 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 ATF7P17544 494 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 ARF4P18085 180 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 ADORA2AP29274 412 aa16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 GABRB2P47870 512 aa16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 VPS41P49754 854 aa16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 PTPN11Q06124 597 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 KAZNQ674X7 775 aa16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 GSTA5Q7RTV2 222 aa16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 ZCCHC9Q8N567 271 aaKnown RBP16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 SLC10A4Q96EP9 437 aa16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 ZNF317Q96PQ6 595 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 DDX20Q9UHI6 824 aaKnown RBP16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 SLC45A1Q9Y2W3 748 aa16.17■□□□□ 0.18
UBE2D3-207ENST00000394801 PLXNA1Q9UIW2 1896 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 STRNO43815 780 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 STAU1O95793 577 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 SLC25A11Q02978 314 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 TAZQ16635 292 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 QPCTQ16769 361 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 LONRF1Q17RB8 773 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 MTHFD1LQ6UB35 978 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 ARFGAP1Q8N6T3 406 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 AFG1LQ8WV93 481 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 CHMP6Q96FZ7 201 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 TMEM176AQ96HP8 235 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 TWNKQ96RR1 684 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 CPXM1Q96SM3 734 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 ELOVL4Q9GZR5 314 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 ZNF148Q9UQR1 794 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 AKT3Q9Y243 479 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 DNALI1O14645 258 aaPredicted RBP16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 LRCH4O75427 683 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 CSDE1O75534 798 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 ITGBL1O95965 494 aaPredicted RBP16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 ITGAVP06756 1048 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 DRD4P21917 467 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 PSMA2P25787 234 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 VCPP55072 806 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 PSMC1P62191 440 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 PPARDQ03181 441 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 CNGA2Q16280 664 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 P3H1Q32P28 736 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 ZFYVE27Q5T4F4 411 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 XYLT1Q86Y38 959 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 JOSD2Q8TAC2 188 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 SELENOSQ9BQE4 189 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 SMYD3Q9H7B4 428 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 TJP2Q9UDY2 1190 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 C2CD2Q9Y426 696 aa16.16■□□□□ 0.18
UBE2D3-207ENST00000394801 LRRD1A4D1F6 860 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 KRT7P08729 469 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 P4HA1P13674 534 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.181e-8■■□□□ 14.5
UBE2D3-207ENST00000394801 ATP5DP30049 168 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 ACAP1Q15027 740 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 NT5DC4Q86YG4 428 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 KIAA0319LQ8IZA0 1049 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 GLIS1Q8NBF1 620 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 SLC35B2Q8TB61 432 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 MCRS1Q96EZ8 462 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 CPB2Q96IY4 423 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 PWWP2AQ96N64 755 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 INTS9Q9NV88 658 aaKnown RBP16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 A0A1B0GUA9 196 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 KIAA0754O94854 1291 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 VTNP04004 478 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 HMGCRP04035 888 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 VDRP11473 427 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 HOXD8P13378 290 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 GPD2P43304 727 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 INCA1Q0VD86 236 aa16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 HADHQ16836 314 aaKnown RBP16.15■□□□□ 0.18
UBE2D3-207ENST00000394801 CCDC142Q17RM4 750 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms