RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 CCNG2Q16589 344 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 ATP13A4Q4VNC1 1196 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 SPATA21Q7Z572 469 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 GLIS1Q8NBF1 620 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 ATL2Q8NHH9 583 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 SPOCK2Q92563 424 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
PTBP1-204ENST00000394601 BTBD7Q9P203 1132 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 K7ERI5 159 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 ASAP2O43150 1006 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 OAS1P00973 400 aaKnown RBP16.37■□□□□ 0.21
PTBP1-204ENST00000394601 PYGBP11216 843 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 MAN1A1P33908 653 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 STXBP2Q15833 593 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 CWF19L1Q69YN2 538 aaKnown RBP16.37■□□□□ 0.21
PTBP1-204ENST00000394601 CYP4X1Q8N118 509 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 MSTO1Q9BUK6 570 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 SOWAHBA6NEL2 793 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 ADCY3O60266 1144 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 ASS1P00966 412 aaKnown RBP16.37■□□□□ 0.21
PTBP1-204ENST00000394601 STRN3Q13033 797 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 SLFN12LQ6IEE8 588 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 TRIM72Q6ZMU5 477 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.37■□□□□ 0.215e-12■■□□□ 14.1
PTBP1-204ENST00000394601 ZNF606Q8WXB4 792 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 FGD4Q96M96 766 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 NINJ2Q9NZG7 142 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 PCDHB4Q9Y5E5 795 aa16.37■□□□□ 0.21
PTBP1-204ENST00000394601 TMEM191CA6NGB0 347 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 TMEM191BP0C7N4 346 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 KLC1Q07866 573 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 EXD1Q8NHP7 514 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 ANKFY1Q9P2R3 1169 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 LRRIQ4A6NIV6 560 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 MAFO75444 373 aaPredicted RBP16.36■□□□□ 0.21
PTBP1-204ENST00000394601 RTN3O95197 1032 aaPredicted RBP16.36■□□□□ 0.21
PTBP1-204ENST00000394601 DNAJC3Q13217 504 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 MTM1Q13496 603 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 NCOA4Q13772 614 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 LRRC36Q1X8D7 754 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 TXNRD3NBQ6F5E7 133 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 LBX2Q6XYB7 198 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 RHOT1Q8IXI2 618 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 SERPINB12Q96P63 405 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 CYTH2Q99418 400 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 TRAIPQ9BWF2 469 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 HOXC10Q9NYD6 342 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 GJA3Q9Y6H8 435 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 GCAP28676 217 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 KYNUQ16719 465 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 TSNAXIP1Q2TAA8 658 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 BRSK2Q8IWQ3 736 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 DNAJC9Q8WXX5 260 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 OSBPL8Q9BZF1 889 aa16.36■□□□□ 0.21
PTBP1-204ENST00000394601 SOCS7O14512 581 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 PIAS1O75925 651 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 LDHAP00338 332 aaKnown RBP16.35■□□□□ 0.21
PTBP1-204ENST00000394601 BRAFP15056 766 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 CD58P19256 250 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 DEUP1Q05D60 604 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 CALCOCO2Q13137 446 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 TBC1D25Q3MII6 688 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 DLK2Q6UY11 383 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 PHC3Q8NDX5 983 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 PLVAPQ9BX97 442 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 DCTN4Q9UJW0 460 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 TLR3O15455 904 aaKnown RBP16.35■□□□□ 0.21
PTBP1-204ENST00000394601 USP2O75604 605 aaPredicted RBP16.35■□□□□ 0.21
PTBP1-204ENST00000394601 ZBTB7AO95365 584 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 PTDSS1P48651 473 aaKnown RBP16.35■□□□□ 0.21
PTBP1-204ENST00000394601 GRM1Q13255 1194 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 CUL3Q13618 768 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 CHST13Q8NET6 341 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 DEPTORQ8TB45 409 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 FEZF2Q8TBJ5 459 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 P3H4Q92791 437 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 GBP5Q96PP8 586 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 SLITRK1Q96PX8 696 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 PITPNM3Q9BZ71 974 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 OCEL1Q9H607 264 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 HOMER3Q9NSC5 361 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 LMCD1Q9NZU5 365 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 ASIC3Q9UHC3 531 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 SNCAIPQ9Y6H5 919 aa16.35■□□□□ 0.21
PTBP1-204ENST00000394601 CCDC160A6NGH7 325 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 TBXAS1P24557 533 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 SETDB1Q15047 1291 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 CROCCP2Q86T23 111 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 MAIP1Q8WWC4 291 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 PRPF31Q8WWY3 499 aaKnown RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 ABTB1Q969K4 478 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 UBE2OQ9C0C9 1292 aaKnown RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 ALG13Q9NP73 1137 aaKnown RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 SLCO1B3Q9NPD5 702 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 LGALS13Q9UHV8 139 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 C3orf70A6NLC5 250 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 PROZP22891 400 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 CDH5P33151 784 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-204ENST00000394601 ZPBP2Q6X784 338 aa16.34■□□□□ 0.21
PTBP1-204ENST00000394601 ARHGAP22Q7Z5H3 698 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms