RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ACVR2BQ13705 512 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 NCOA4Q13772 614 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 SPARCL1Q14515 664 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 MMEL1Q495T6 779 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 RGMBQ6NW40 437 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 FOXR2Q6PJQ5 311 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 TRIM72Q6ZMU5 477 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 ANKRD23Q86SG2 305 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 REPS2Q8NFH8 660 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 OR6B3Q8NGW1 331 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 CCT6BQ92526 530 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 KIF12Q96FN5 646 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 SLITRK6Q9H5Y7 841 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 EBF2Q9HAK2 575 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 SATB2Q9UPW6 733 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 NOC2LQ9Y3T9 749 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 ZC3H4Q9UPT8 1303 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 CHD4Q14839 1912 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 TMEM120BA0PK00 339 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 SLC15A5A6NIM6 579 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 RASA4BC9J798 803 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 E7ENQ6 273 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 GOLGA8SH3BPF8 625 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 OGTO15294 1046 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 RASA4O43374 803 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 TOM1L1O75674 476 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 NPTXRO95502 500 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 HLA-DRAP01903 254 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 S100BP04271 92 aaPredicted RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 ETS2P15036 469 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 PGM1P36871 562 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 LAMTOR4Q0VGL1 99 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 MPP3Q13368 585 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 SCYL2Q6P3W7 929 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 RGS9BPQ6ZS82 235 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 CREG2Q8IUH2 290 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 DDX18Q9NVP1 670 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 NDUFA13Q9P0J0 144 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 KCNH4Q9UQ05 1017 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 MYH1P12882 1939 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 UNCXA6NJT0 531 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 BTBD19C9JJ37 291 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 FANCGO15287 622 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 CCDC22O60826 627 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 RTN2O75298 545 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 DRD4P21917 467 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 FGFR4P22455 802 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 CASP5P51878 434 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 RBP5P82980 135 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 TMEM62Q0P6H9 643 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 LLGL1Q15334 1064 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 NAB2Q15742 525 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 DAB2IPQ5VWQ8 1189 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 DSTYKQ6XUX3 929 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 EPM2AIP1Q7L775 607 aaPredicted RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 RBM12BQ8IXT5 1001 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 IQCKQ8N0W5 287 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 LRRC43Q8N309 656 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 TINF2Q9BSI4 451 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 IFT122Q9HBG6 1241 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 RXFP1Q9HBX9 757 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 TBC1D23Q9NUY8 699 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 ITGB1BP2Q9UKP3 347 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 PIN4Q9Y237 131 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 DIS3Q9Y2L1 958 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 TNRC6CQ9HCJ0 1690 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 CACNA1SQ13698 1873 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 ZNF536O15090 1300 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 C17orf102A2RUQ5 167 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 ZBTB48P10074 688 aaPredicted RBP5.96□□□□□ -1.45
RFFL-202ENST00000394597 HSPA6P17066 643 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 SP100P23497 879 aaPredicted RBP5.96□□□□□ -1.45
RFFL-202ENST00000394597 PAX3P23760 479 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 ADCYAP1R1P41586 468 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 PTDSS1P48651 473 aaKnown RBP5.96□□□□□ -1.45
RFFL-202ENST00000394597 USP46P62068 366 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 GTF2BQ00403 316 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 DMPKQ09013 629 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 KCNA1Q09470 495 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 SLC29A2Q14542 456 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 WDR72Q3MJ13 1102 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 KCTD21Q4G0X4 260 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 SPOUT1Q5T280 376 aaKnown RBP5.96□□□□□ -1.45
RFFL-202ENST00000394597 GJB7Q6PEY0 223 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 ABHD15Q6UXT9 468 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 PLPPR4Q7Z2D5 763 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 GPR142Q7Z601 462 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 USP38Q8NB14 1042 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 ICA1LQ8NDH6 482 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 SCG3Q8WXD2 468 aaKnown RBP5.96□□□□□ -1.45
RFFL-202ENST00000394597 MAML3Q96JK9 1138 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 TRIM51Q9BSJ1 452 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 LRFN2Q9ULH4 789 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 AGAP1Q9UPQ3 857 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 SLX4Q8IY92 1834 aa5.96□□□□□ -1.45
RFFL-202ENST00000394597 RBM47A0AV96 593 aaKnown RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 A8MUI8 341 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 MIF4GDA9UHW6 222 aaKnown RBP5.96□□□□□ -1.46
RFFL-202ENST00000394597 O00370 1275 aa5.96□□□□□ -1.46
RFFL-202ENST00000394597 KPNA6O60684 536 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms