RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 RAET1EQ8TD07 263 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 PXYLP1Q8TE99 480 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 CAVIN3Q969G5 261 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 UBXN6Q9BZV1 441 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 FAM105AQ9NUU6 356 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 FSCN2O14926 492 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 TTI1O43156 1089 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 TAS2R40P59535 323 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 PSMC1P62191 440 aaKnown RBP23.45■■□□□ 1.35
HMGA2-203ENST00000393578 SOX4Q06945 474 aaPredicted RBP23.45■■□□□ 1.35
HMGA2-203ENST00000393578 ZNF252P-AS1Q0IIN9 211 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 PDCLQ13371 301 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 CYP1B1Q16678 543 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 DAB2IPQ5VWQ8 1189 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 DPH6Q7L8W6 267 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 XYLT1Q86Y38 959 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 ZDHHC14Q8IZN3 488 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 NIPA2Q8N8Q9 360 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 ACBD3Q9H3P7 528 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 TSPAN16Q9UKR8 245 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 NFU1Q9UMS0 254 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 USTQ9Y2C2 406 aa23.45■■□□□ 1.35
HMGA2-203ENST00000393578 DNAH12Q6ZR08 3092 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 KRT3P12035 628 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 MAP2K2P36507 400 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 TAF6P49848 677 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 DR1Q01658 176 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 GPS2Q13227 327 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 NNTQ13423 1086 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 SMC1AQ14683 1233 aaKnown RBP23.45■■□□□ 1.34
HMGA2-203ENST00000393578 SV2CQ496J9 727 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 C12orf29Q8N999 325 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 SEC14L1Q92503 715 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 GDAP1L1Q96MZ0 367 aa23.45■■□□□ 1.34
HMGA2-203ENST00000393578 PPP1R10Q96QC0 940 aaKnown RBP23.45■■□□□ 1.34
HMGA2-203ENST00000393578 UTP11Q9Y3A2 253 aaKnown RBP23.45■■□□□ 1.34
HMGA2-203ENST00000393578 TCRBV7S2A1N4TA0A589 114 aa23.44■■□□□ 1.34
HMGA2-203ENST00000393578 PTGESO14684 152 aa23.44■■□□□ 1.34
HMGA2-203ENST00000393578 ERBB2P04626 1255 aa23.44■■□□□ 1.34
HMGA2-203ENST00000393578 ITGA7Q13683 1181 aa23.44■■□□□ 1.34
HMGA2-203ENST00000393578 LRRC38Q5VT99 294 aa23.44■■□□□ 1.34
HMGA2-203ENST00000393578 SND1Q7KZF4 910 aaKnown RBP eCLIP23.44■■□□□ 1.34
HMGA2-203ENST00000393578 ACOT1Q86TX2 421 aa23.44■■□□□ 1.34
HMGA2-203ENST00000393578 MAIP1Q8WWC4 291 aa23.44■■□□□ 1.34
HMGA2-203ENST00000393578 MAGOHBQ96A72 148 aaKnown RBP23.44■■□□□ 1.34
HMGA2-203ENST00000393578 TJP2Q9UDY2 1190 aa23.44■■□□□ 1.34
HMGA2-203ENST00000393578 PCYOX1Q9UHG3 505 aa23.44■■□□□ 1.34
HMGA2-203ENST00000393578 GOLGA8SH3BPF8 625 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 SPTLC1O15269 473 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 LRPAP1P30533 357 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 SSR1P43307 286 aaKnown RBP23.43■■□□□ 1.34
HMGA2-203ENST00000393578 ACLYP53396 1101 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 OGDHQ02218 1023 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 PTK7Q13308 1070 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 SIX1Q15475 284 aaPredicted RBP23.43■■□□□ 1.34
HMGA2-203ENST00000393578 TRADDQ15628 312 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 LIMS2Q7Z4I7 341 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 OR6B3Q8NGW1 331 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 EXD1Q8NHP7 514 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 UBA3Q8TBC4 463 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 FNIP1Q8TF40 1166 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 RUNDC3BQ96NL0 473 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 MIS12Q9H081 205 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 RAB17Q9H0T7 212 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 AGO3Q9H9G7 860 aaKnown RBP23.43■■□□□ 1.34
HMGA2-203ENST00000393578 GOLGA2P5Q9HBQ8 144 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 FAM187AA6NFU0 413 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 RARAP10276 462 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 RFC1P35251 1148 aaPredicted RBP23.43■■□□□ 1.34
HMGA2-203ENST00000393578 C12orf50Q8NA57 414 aaPredicted RBP23.43■■□□□ 1.34
HMGA2-203ENST00000393578 MCRS1Q96EZ8 462 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 ZFP42Q96MM3 310 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 SLC38A7Q9NVC3 462 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 HPCAL4Q9UM19 191 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 NME7Q9Y5B8 376 aa23.43■■□□□ 1.34
HMGA2-203ENST00000393578 F8VP50 259 aa23.42■■□□□ 1.34
HMGA2-203ENST00000393578 LILRA4P59901 499 aa23.42■■□□□ 1.34
HMGA2-203ENST00000393578 GOLGA7BQ2TAP0 167 aa23.42■■□□□ 1.34
HMGA2-203ENST00000393578 PPP1R26Q5T8A7 1209 aaPredicted RBP23.42■■□□□ 1.34
HMGA2-203ENST00000393578 APPL2Q8NEU8 664 aa23.42■■□□□ 1.34
HMGA2-203ENST00000393578 IPO4Q8TEX9 1081 aaKnown RBP23.42■■□□□ 1.34
HMGA2-203ENST00000393578 KBTBD7Q8WVZ9 684 aa23.42■■□□□ 1.34
HMGA2-203ENST00000393578 DNAI2Q9GZS0 605 aa23.42■■□□□ 1.34
HMGA2-203ENST00000393578 A8MXQ7 604 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 PADI3Q9ULW8 664 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 NOD1Q9Y239 953 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 PFKMP08237 780 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 GNL1P36915 607 aaPredicted RBP23.41■■□□□ 1.34
HMGA2-203ENST00000393578 PKDCCQ504Y2 493 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 ARHGAP17Q68EM7 881 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 CCDC137Q6PK04 289 aaKnown RBP23.41■■□□□ 1.34
HMGA2-203ENST00000393578 CCDC50Q8IVM0 306 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 CRYBG2Q8N1P7 616 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 TRAIPQ9BWF2 469 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 LRRC19Q9H756 370 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 ST7Q9NRC1 585 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.41■■□□□ 1.34
HMGA2-203ENST00000393578 HTTP42858 3142 aa23.41■■□□□ 1.34
HMGA2-203ENST00000393578 MOXD2PA6NHM9 499 aa23.4■■□□□ 1.34
HMGA2-203ENST00000393578 MEIS3P2A8K0S8 358 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms