RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 GPHNQ9NQX3 736 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 VPS45Q9NRW7 570 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CMTM6Q9NX76 183 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 GALNT8Q9NY28 637 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 DPP3Q9NY33 737 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TRPM5Q9NZQ8 1165 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TRIM10Q9UDY6 481 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 AMACRQ9UHK6 382 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 C15orf41Q9Y2V0 281 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 NEDD4P46934 1319 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 BHMG1C9JSJ3 638 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 GAS2O43903 313 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 GMFGO60234 142 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CPNE3O75131 537 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 GABBR2O75899 941 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SEC24AO95486 1093 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 FAM107AO95990 144 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 PLATP00750 562 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 EPB42P16452 691 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 ZAP70P43403 619 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 HSPA13P48723 471 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 MCL1Q07820 350 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 ILF3Q12906 894 aaKnown RBP eCLIP3.4□□□□□ -1.873e-7■■■■□ 22.6
PHF3-202ENST00000393387 MOGSQ13724 837 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 PRKD1Q15139 912 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 ZNF772Q68DY9 489 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 ZNF713Q8N859 430 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 TRPC4APQ8TEL6 797 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CKAP2Q8WWK9 683 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 AKAP1Q92667 903 aaKnown RBP eCLIP3.4□□□□□ -1.87
PHF3-202ENST00000393387 CLP1Q92989 425 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 WDR24Q96S15 920 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 RMDN3Q96TC7 470 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 APOL4Q9BPW4 351 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SGIP1Q9BQI5 828 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 ZNF717Q9BY31 904 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 TNKS2Q9H2K2 1166 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CAB39LQ9H9S4 337 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 NXF1Q9UBU9 619 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 HESX1Q9UBX0 185 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 VPS51Q9UID3 782 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TMCO1Q9UM00 188 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 NSD3Q9BZ95 1437 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TMEM120BA0PK00 339 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SRRM3A6NNA2 597 aaPredicted RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 VWA5AO00534 786 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 AP3D1O14617 1153 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 INPP4BO15327 924 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 PPIP5K2O43314 1243 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SNAPC5O75971 98 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 MYO1DO94832 1006 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TSPAN19P0C672 248 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 PRKAR2AP13861 404 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 NR4A1P22736 598 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 STOMP27105 288 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 YWHAQP27348 245 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 DSG3P32926 999 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 GMFBP60983 142 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 NCALDP61601 193 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 YWHAZP63104 245 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 GSTO1P78417 241 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 STX4Q12846 297 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 DENND5AQ6IQ26 1287 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 MZT2BQ6NZ67 158 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CYP2R1Q6VVX0 501 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 MTDHQ86UE4 582 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 CDAN1Q8IWY9 1227 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 CPXCR1Q8N123 301 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 TBC1D19Q8N5T2 526 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 SGF29Q96ES7 293 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 NDNQ99608 321 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 GPATCH1Q9BRR8 931 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 ZSWIM6Q9HCJ5 1215 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 WDR6Q9NNW5 1121 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 ERAP1Q9NZ08 941 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 HEY2Q9UBP5 337 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 EIF3KQ9UBQ5 218 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 CTNNAL1Q9UBT7 734 aa3.4□□□□□ -1.87
PHF3-202ENST00000393387 RUVBL2Q9Y230 463 aaKnown RBP3.4□□□□□ -1.87
PHF3-202ENST00000393387 SOS2Q07890 1332 aaPredicted RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 NPHP3-ACAD11A0A0J9YXS1 232 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 RBM47A0AV96 593 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 BTBD19C9JJ37 291 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 NEDD8-MDP1E9PL57 170 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 NR5A2O00482 541 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 SPTLC1O15269 473 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 CPSF4O95639 269 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 ASS1P00966 412 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 MLNP12872 115 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 CYP11B1P15538 503 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 IRAK1P51617 712 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 MARSP56192 900 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 NLRP11P59045 1033 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 USP46P62068 366 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 PSMC5P62195 406 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 MYBPC1Q00872 1141 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 RPL6Q02878 288 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 MTF1Q14872 753 aa3.39□□□□□ -1.87
PHF3-202ENST00000393387 TWF2Q6IBS0 349 aaKnown RBP3.39□□□□□ -1.87
PHF3-202ENST00000393387 ZNF746Q6NUN9 644 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms