RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MYO16Q9Y6X6 1858 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 SOBPA7XYQ1 873 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 RNF225M0QZC1 329 aaPredicted RBP14.13□□□□□ -0.15
USP44-202ENST00000393091 ADH1AP07327 375 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 ATF2P15336 505 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 TRIM21P19474 475 aaKnown RBP14.13□□□□□ -0.15
USP44-202ENST00000393091 STAT1P42224 750 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 GSCP56915 257 aaPredicted RBP14.13□□□□□ -0.15
USP44-202ENST00000393091 DRAP1Q14919 205 aaPredicted RBP14.13□□□□□ -0.15
USP44-202ENST00000393091 VSTM1Q6UX27 236 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 PAQR9Q6ZVX9 377 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 PDLIM2Q96JY6 352 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 C8orf48Q96LL4 319 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 CRACR2AQ9BSW2 395 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 PLEKHA4Q9H4M7 779 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 MMRN2Q9H8L6 949 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 ALG13Q9NP73 1137 aaKnown RBP14.13□□□□□ -0.15
USP44-202ENST00000393091 BZW2Q9Y6E2 419 aaKnown RBP14.13□□□□□ -0.15
USP44-202ENST00000393091 CXCL14O95715 111 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 CNPP09543 421 aaKnown RBP14.12□□□□□ -0.15
USP44-202ENST00000393091 FERP16591 822 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 LMO2P25791 158 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 GSE1Q14687 1217 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 CTXN3Q4LDR2 81 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 RIN2Q8WYP3 895 aaPredicted RBP14.12□□□□□ -0.15
USP44-202ENST00000393091 TWNKQ96RR1 684 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 DZANK1Q9NVP4 752 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 NXF1Q9UBU9 619 aaKnown RBP14.12□□□□□ -0.15
USP44-202ENST00000393091 TEX28O15482 410 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 CCDC172P0C7W6 258 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 SETSIPP0DME0 302 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 TSPY1Q01534 308 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 PPP1R2P3Q6NXS1 205 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 C4orf50Q6ZRC1 276 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 PPM1KQ8N3J5 372 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 RBBP8NLQ8NC74 664 aaPredicted RBP14.12□□□□□ -0.15
USP44-202ENST00000393091 HASPINQ8TF76 798 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 RABGGTAQ92696 567 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 KAT5Q92993 513 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 ANAPC1Q9H1A4 1944 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 FAM92AA1XBS5 289 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 FOXN3O00409 490 aaPredicted RBP14.12□□□□□ -0.15
USP44-202ENST00000393091 CDH8P55286 799 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 ROR1Q01973 937 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
USP44-202ENST00000393091 LRRTM3Q86VH5 581 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 MICALL1Q8N3F8 863 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 ZNF276Q8N554 614 aa14.12□□□□□ -0.15
USP44-202ENST00000393091 NOTCH4Q99466 2003 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 WDR27A2RRH5 827 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 I3L4J1 428 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 MICAL2O94851 1124 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 LSM8O95777 96 aaKnown RBP14.11□□□□□ -0.15
USP44-202ENST00000393091 HNRNPA1P09651 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP44-202ENST00000393091 WEE2P0C1S8 567 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 HAPLN1P10915 354 aaPredicted RBP14.11□□□□□ -0.15
USP44-202ENST00000393091 RAP1GAPP47736 663 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 PLD1Q13393 1074 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 GJB7Q6PEY0 223 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 GDPD5Q8WTR4 605 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 ARNTL2Q8WYA1 636 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 KCTD13Q8WZ19 329 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 PANX2Q96RD6 677 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 MMS19Q96T76 1030 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 B3GNT5Q9BYG0 378 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 ZNF518BQ9C0D4 1074 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 ZDHHC7Q9NXF8 308 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 HMGXB4Q9UGU5 601 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP44-202ENST00000393091 MTMR11A4FU01 709 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 O00370 1275 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 POLR2FP61218 127 aaKnown RBP14.11□□□□□ -0.15
USP44-202ENST00000393091 GRIN2CQ14957 1233 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 RAB41Q5JT25 222 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 HGSNATQ68CP4 663 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 RRAGAQ7L523 313 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 TRIM5Q9C035 493 aa14.11□□□□□ -0.15
USP44-202ENST00000393091 HIDE1A8MVS5 230 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 A8MXQ7 604 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 MED7O43513 233 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 IRS1P35568 1242 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 EPHA5P54756 1037 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 ADAM15Q13444 863 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 PRSS55Q6UWB4 352 aaPredicted RBP14.1□□□□□ -0.15
USP44-202ENST00000393091 TRIM72Q6ZMU5 477 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 TRMT2BQ96GJ1 504 aaKnown RBP14.1□□□□□ -0.15
USP44-202ENST00000393091 ZSWIM1Q9BR11 485 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 ENTPD7Q9NQZ7 604 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 ASB3Q9Y575 518 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 MFAP3LO75121 409 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 APBA1Q02410 837 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 CNGA4Q8IV77 575 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 FUKQ8N0W3 1084 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 ANKRD52Q8NB46 1076 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 ZNF397Q8NF99 534 aaPredicted RBP14.1□□□□□ -0.15
USP44-202ENST00000393091 SLC30A5Q8TAD4 765 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 PPP2R3CQ969Q6 453 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 TTLL2Q9BWV7 592 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 DPEP3Q9H4B8 488 aa14.1□□□□□ -0.15
USP44-202ENST00000393091 FAM207AQ9NSI2 230 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms