RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 GM2AP17900 193 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 DYNLL1P63167 89 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 PHC1P78364 1004 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 CAV1Q03135 178 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 NCOA4Q13772 614 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 MYLK3Q32MK0 819 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 SLC10A5Q5PT55 438 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 MFSD14BQ5SR56 506 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 AAGABQ6PD74 315 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 DPP8Q6V1X1 898 aaPredicted RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 CDH24Q86UP0 819 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 GATAD2AQ86YP4 633 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 BRSK2Q8IWQ3 736 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 TTC30BQ8N4P2 665 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 HDAC2Q92769 488 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 GJD4Q96KN9 370 aaPredicted RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 DACH2Q96NX9 599 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 BEGAINQ9BUH8 593 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 C1orf50Q9BV19 199 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 KCNMB3Q9NPA1 279 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 RIC8AQ9NPQ8 531 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 GPRC5DQ9NZD1 345 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 HESX1Q9UBX0 185 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 AP4B1Q9Y6B7 739 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 PEX1O43933 1283 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 MYO1DO94832 1006 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 HLA-DOAP06340 250 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 FDFT1P37268 417 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ALDH1A3P47895 512 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ARHGAP44Q17R89 818 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ZNF829Q3KNS6 432 aaPredicted RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ARL6IP4Q66PJ3 421 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 AMIGO2Q86SJ2 522 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ZFP28Q8NHY6 868 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 SCFD2Q8WU76 684 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ZC3H15Q8WU90 426 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 KRT35Q92764 455 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 UTP4Q969X6 686 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 PPP1R10Q96QC0 940 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 C17orf80Q9BSJ5 609 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 CHID1Q9BWS9 393 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 IRF2BPLQ9H1B7 796 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 HMG20AQ9NP66 347 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ZMAT5Q9UDW3 170 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 TAGLN3Q9UI15 199 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 CES2O00748 559 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 ZNF263O14978 683 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 CHMP2AO43633 222 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 CLASP2O75122 1294 aaKnown RBP7.96□□□□□ -1.13
VTI1A-201ENST00000393077 IFNB1P01574 187 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 CHRNB1P11230 501 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 NR4A1P22736 598 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 SERPINB10P48595 397 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 GPC3P51654 580 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 DLG4P78352 724 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 SLC15A2Q16348 729 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 PKN1Q16512 942 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 CARTPTQ16568 116 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 SNRNP48Q6IEG0 339 aaKnown RBP7.96□□□□□ -1.13
VTI1A-201ENST00000393077 POTEAQ6S8J7 498 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 APTXQ7Z2E3 356 aaKnown RBP7.96□□□□□ -1.13
VTI1A-201ENST00000393077 LCORLQ8N3X6 602 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 OR7G1Q8NGA0 311 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 EFHD2Q96C19 240 aaPredicted RBP7.96□□□□□ -1.13
VTI1A-201ENST00000393077 C2orf49Q9BVC5 232 aaPredicted RBP7.96□□□□□ -1.13
VTI1A-201ENST00000393077 PACSIN1Q9BY11 444 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 KRT82Q9NSB4 513 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 HPS5Q9UPZ3 1129 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 ERVK-11Q9UQG0 969 aa7.96□□□□□ -1.13
VTI1A-201ENST00000393077 SALL1Q9NSC2 1324 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 CYP2D7A0A087X1C5 515 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 KANSL1LA0AUZ9 987 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 MIF4GDA9UHW6 222 aaKnown RBP7.96□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF862O60290 1169 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 SNX2O60749 519 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 EPN2O95208 641 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 KCNJ1P48048 391 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 PTENP60484 403 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 FKBP3Q00688 224 aaKnown RBP7.96□□□□□ -1.14
VTI1A-201ENST00000393077 DLG1Q12959 904 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 DOK7Q18PE1 504 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 RWDD4Q6NW29 188 aaKnown RBP7.96□□□□□ -1.14
VTI1A-201ENST00000393077 TTC27Q6P3X3 843 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 Q6ZNX1 250 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 ARHGAP27Q6ZUM4 889 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 BPHLQ86WA6 291 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-201ENST00000393077 HORMAD1Q86X24 394 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 ULK2Q8IYT8 1036 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 TRPC4APQ8TEL6 797 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 BTBD9Q96Q07 612 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 RAD21L1Q9H4I0 556 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 MARCOQ9UEW3 520 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-201ENST00000393077 INPP5FQ9Y2H2 1132 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 COL4A3BPQ9Y5P4 624 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 A0A087WXM4 84 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 CSPG5O95196 566 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 INHBAP08476 426 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 RPA1P27694 616 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 PEX2P28328 305 aa7.96□□□□□ -1.14
VTI1A-201ENST00000393077 CLK3P49761 638 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms