RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 TMEM109Q9BVC6 243 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 TRAIPQ9BWF2 469 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 SETD4Q9NVD3 440 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 DPP3Q9NY33 737 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 ANAPC5Q9UJX4 755 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 ITGA11Q9UKX5 1188 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 C2CD2Q9Y426 696 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 SMIM23A6NLE4 172 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 LIASO43766 372 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 MICAL2O94851 1124 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 PSMA2P25787 234 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 COPS2P61201 443 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 CAV1Q03135 178 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 FAM110CQ1W6H9 321 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 IQSEC1Q6DN90 963 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 XYLT1Q86Y38 959 aa27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 DDX23Q9BUQ8 820 aaKnown RBP27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 DDX56Q9NY93 547 aaKnown RBP27.02■■□□□ 1.92
SMARCD3-203ENST00000392811 NDUFAB1O14561 156 aa27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 ERBB2P04626 1255 aa27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 FKBP1BP68106 108 aa27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 KIZQ2M2Z5 673 aa27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 SPRYD7Q5W111 196 aa27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 SRLQ86TD4 932 aa27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 CCDC89Q8N998 374 aa27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 RRP15Q9Y3B9 282 aaKnown RBP27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 KAT6AQ92794 2004 aa27.01■■□□□ 1.91
SMARCD3-203ENST00000392811 hCG_1818297A0A087WSY0 165 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 LRRD1A4D1F6 860 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 PTPN7P35236 360 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 RBP5P82980 135 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 PRUNE1Q86TP1 453 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 EPS8L3Q8TE67 593 aaKnown RBP27■■□□□ 1.91
SMARCD3-203ENST00000392811 SYNCQ9H7C4 482 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 DNPEPQ9ULA0 475 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 KLRC2P26717 231 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 GRM5P41594 1212 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 CDKN2BP42772 138 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 SEC24CP53992 1094 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 GSCP56915 257 aaPredicted RBP27■■□□□ 1.91
SMARCD3-203ENST00000392811 C6orf118Q5T5N4 469 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 GSTA5Q7RTV2 222 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 CROCCP2Q86T23 111 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 ARFGAP1Q8N6T3 406 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 HEXIM2Q96MH2 286 aaKnown RBP27■■□□□ 1.91
SMARCD3-203ENST00000392811 METTL5Q9NRN9 209 aaKnown RBP27■■□□□ 1.91
SMARCD3-203ENST00000392811 WDR35Q9P2L0 1181 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 CITO14578 2027 aa27■■□□□ 1.91
SMARCD3-203ENST00000392811 M0QYV0 167 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 RGS16O15492 202 aaPredicted RBP26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 VDRP11473 427 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 TMEM62Q0P6H9 643 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 TFDP3Q5H9I0 405 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 POLNQ7Z5Q5 900 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 KIF12Q96FN5 646 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 TSPYL1Q9H0U9 437 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 SRRM3A6NNA2 597 aaPredicted RBP26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 SLC25A11Q02978 314 aaKnown RBP26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 LMNB2Q03252 620 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 INCA1Q0VD86 236 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 ZNF268Q14587 947 aaPredicted RBP26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 CNGA2Q16280 664 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 DRICH1Q6PGQ1 229 aaPredicted RBP26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 NT5DC4Q86YG4 428 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 EMC1Q8N766 993 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 BBOF1Q8ND07 529 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 FNIP1Q8TF40 1166 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 FAM49AQ9H0Q0 323 aaPredicted RBP26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 ADAMTS10Q9H324 1103 aa26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 DNAJC17Q9NVM6 304 aaKnown RBP26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 BARX2Q9UMQ3 279 aaPredicted RBP26.99■■□□□ 1.91
SMARCD3-203ENST00000392811 EBAG9O00559 213 aa26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 LRCH4O75427 683 aa26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 NPTXRO95502 500 aa26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 ACSL3O95573 720 aa26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 STAU1O95793 577 aaKnown RBP26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 SLCO1A2P46721 670 aa26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 NDST1P52848 882 aa26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 IZUMO3Q5VZ72 239 aa26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 PWWP2AQ96N64 755 aa26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 PPANQ9NQ55 473 aaKnown RBP26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 GINS2Q9Y248 185 aa26.98■■□□□ 1.91
SMARCD3-203ENST00000392811 SLC15A5A6NIM6 579 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 C3orf70A6NLC5 250 aaPredicted RBP26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 RASGRF2O14827 1237 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 HMGCRP04035 888 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 GPD2P43304 727 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 IFI35P80217 286 aaPredicted RBP26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 DCAF4L1Q3SXM0 396 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 NLRP14Q86W24 1093 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 PPP1R13LQ8WUF5 828 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 CXCL16Q9H2A7 254 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 ZWILCHQ9H900 591 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 ZNF148Q9UQR1 794 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 RRN3P2A6NIE6 340 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 IL1R2P27930 398 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 HOXA11P31270 313 aaPredicted RBP26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 GABRB2P47870 512 aa26.97■■□□□ 1.91
SMARCD3-203ENST00000392811 DPH6Q7L8W6 267 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms