RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 OSMRQ99650 979 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 PRMT7Q9NVM4 692 aaPredicted RBP20.07■□□□□ 0.8
CCDC50-202ENST00000392456 RAB20Q9NX57 234 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 TSKSQ9UJT2 592 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 CPSF3Q9UKF6 684 aaKnown RBP20.07■□□□□ 0.8
CCDC50-202ENST00000392456 FAM170AA1A519 330 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 KIAA0391O15091 583 aaKnown RBP20.07■□□□□ 0.8
CCDC50-202ENST00000392456 OGTO15294 1046 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 AKR1B10O60218 316 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 ADAMTS4O75173 837 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 CETN1Q12798 172 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 C16orf87Q6PH81 154 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 NCCRP1Q6ZVX7 275 aaPredicted RBP20.07■□□□□ 0.8
CCDC50-202ENST00000392456 FBXL13Q8NEE6 735 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 KREMEN1Q96MU8 473 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 ADAMTS1Q9UHI8 967 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 TNFSF13BQ9Y275 285 aa20.07■□□□□ 0.8
CCDC50-202ENST00000392456 A0A087X0T9 212 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 VNN1O95497 513 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 PDHA1P08559 390 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 FAM228BP0C875 321 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 RARBP10826 455 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 ATP6V1C1P21283 382 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 TNFRSF8P28908 595 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 USP46P62068 366 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 PAK2Q13177 524 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 FAM187BQ17R55 369 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 IQCF2Q8IXL9 164 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 CAGE1Q8TC20 777 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 TMEM40Q8WWA1 233 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 PDZD7Q9H5P4 517 aa20.06■□□□□ 0.8
CCDC50-202ENST00000392456 TSPAN1O60635 241 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 PAEPP09466 180 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 KLC1Q07866 573 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 ZACNQ401N2 412 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 BRSK2Q8IWQ3 736 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 SLC15A3Q8IY34 581 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 C7orf31Q8N865 590 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 AZIN2Q96A70 460 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 ACP6Q9NPH0 428 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 XPNPEP3Q9NQH7 507 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 SMIM35A0A1B0GVV1 85 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 SSU72P8A0A1W2PR75 194 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 PFDN1O60925 122 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 DRD4P21917 467 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 GTF2H1P32780 548 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 PLOD1Q02809 727 aaPredicted RBP20.05■□□□□ 0.8
CCDC50-202ENST00000392456 SPOPLQ6IQ16 392 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 PPM1KQ8N3J5 372 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 OLIG1Q8TAK6 271 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 HELQQ8TDG4 1101 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 ZNF296Q8WUU4 475 aaPredicted RBP20.05■□□□□ 0.8
CCDC50-202ENST00000392456 LRRC1Q9BTT6 524 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 UPF3AQ9H1J1 476 aaKnown RBP20.05■□□□□ 0.8
CCDC50-202ENST00000392456 DLGAP2Q9P1A6 1054 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 CIDEBQ9UHD4 219 aa20.05■□□□□ 0.8
CCDC50-202ENST00000392456 ZFXP17010 805 aaPredicted RBP20.04■□□□□ 0.8
CCDC50-202ENST00000392456 SOX5P35711 763 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 KCNJ2P63252 427 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.04■□□□□ 0.8
CCDC50-202ENST00000392456 VCX3BQ9H321 246 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 VCX3AQ9NNX9 186 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 MKI67P46013 3256 aaKnown RBP20.04■□□□□ 0.8
CCDC50-202ENST00000392456 C17orf102A2RUQ5 167 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 LCA5LO95447 670 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 HOXC8P31273 242 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 PCK1P35558 622 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 STAT1P42224 750 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 KCNA10Q16322 511 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 VCXQ9H320 206 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 ADAM22Q9P0K1 906 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 PCDHA13Q9Y5I0 950 aa20.04■□□□□ 0.8
CCDC50-202ENST00000392456 CST3P01034 146 aaPredicted RBP20.03■□□□□ 0.8
CCDC50-202ENST00000392456 CXCL8P10145 99 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 HOXA11P31270 313 aaPredicted RBP20.03■□□□□ 0.8
CCDC50-202ENST00000392456 HPDP32754 393 aaPredicted RBP20.03■□□□□ 0.8
CCDC50-202ENST00000392456 OXCT1P55809 520 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 BIRC3Q13489 604 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 GET4Q7L5D6 327 aaPredicted RBP20.03■□□□□ 0.8
CCDC50-202ENST00000392456 USP37Q86T82 979 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 RAPGEF5Q92565 580 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 DHX38Q92620 1227 aaKnown RBP20.03■□□□□ 0.8
CCDC50-202ENST00000392456 WNT8BQ93098 351 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 TRAIPQ9BWF2 469 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 HLA-DRAP01903 254 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 ASGR1P07306 291 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 GNAZP19086 355 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 CCDC122Q5T0U0 273 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 ZNF410Q86VK4 478 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 HOOK3Q86VS8 718 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 CCDC197Q8NCU1 140 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 RAET1EQ8TD07 263 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 CGRRF1Q99675 332 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 MTG1Q9BT17 334 aaPredicted RBP20.03■□□□□ 0.8
CCDC50-202ENST00000392456 KATNAL1Q9BW62 490 aa20.03■□□□□ 0.8
CCDC50-202ENST00000392456 IFIH1Q9BYX4 1025 aaKnown RBP20.03■□□□□ 0.8
CCDC50-202ENST00000392456 GSTT1P30711 240 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 PRKCIP41743 596 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 KRT83P78385 493 aa20.02■□□□□ 0.8
CCDC50-202ENST00000392456 MAP3K21Q5TCX8 1036 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms