RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ITGA11Q9UKX5 1188 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 MAGED2Q9UNF1 606 aaPredicted RBP17.83■□□□□ 0.45
PTPRK-208ENST00000392449 DNAH14Q0VDD8 3507 aa17.83■□□□□ 0.44
PTPRK-208ENST00000392449 DPYSL4O14531 572 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 CUTAO60888 179 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 HUS1O60921 280 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 PRPF40AO75400 957 aaKnown RBP17.82■□□□□ 0.44
PTPRK-208ENST00000392449 YEATS4O95619 227 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 CHRNB1P11230 501 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 CYP2F1P24903 491 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 CDC25CP30307 473 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 TSPY1Q01534 308 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 DDR2Q16832 855 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 NELFCDQ8IXH7 590 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 LRRC52Q8N7C0 313 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 C2orf15Q8WU43 125 aaKnown RBP17.82■□□□□ 0.44
PTPRK-208ENST00000392449 SNX21Q969T3 373 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 PKMYT1Q99640 499 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 BLZF1Q9H2G9 400 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 INTS13Q9NVM9 706 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 HSPBP1Q9NZL4 362 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 CCL26Q9Y258 94 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 ZNF638Q14966 1978 aaKnown RBP17.82■□□□□ 0.44
PTPRK-208ENST00000392449 FGF19O95750 216 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 HOXC13P31276 330 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 NLRP12P59046 1061 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 RBP5P82980 135 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 SOWAHAQ2M3V2 549 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 INTS6LQ5JSJ4 861 aaKnown RBP17.82■□□□□ 0.44
PTPRK-208ENST00000392449 TXNDC8Q6A555 127 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 Q6ZS52 159 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 EPM2AIP1Q7L775 607 aaPredicted RBP17.82■□□□□ 0.44
PTPRK-208ENST00000392449 ADGRF2Q8IZF7 708 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 MAB21L3Q8N8X9 362 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 RDH13Q8NBN7 331 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 ZBTB44Q8NCP5 570 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 RIN3Q8TB24 985 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 ATRIPQ8WXE1 791 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 GCNAQ96QF7 691 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 ZSCAN32Q9NX65 697 aa17.82■□□□□ 0.44
PTPRK-208ENST00000392449 MYBPHLA2RUH7 354 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 SPECC1L-ADORA2AF8WAN1 911 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 CLIC2O15247 247 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 POLR2DO15514 142 aaKnown RBP17.81■□□□□ 0.44
PTPRK-208ENST00000392449 TGFB1I1O43294 461 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 ATP2C2O75185 946 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 F11P03951 625 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 ZSCAN22P10073 491 aaPredicted RBP17.81■□□□□ 0.44
PTPRK-208ENST00000392449 TDGF1P13385 188 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 CTHP32929 405 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 PSMC1P62191 440 aaKnown RBP17.81■□□□□ 0.44
PTPRK-208ENST00000392449 SATB1Q01826 763 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 SMARCB1Q12824 385 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 FAM26FQ5R3K3 315 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 GRAMD1CQ8IYS0 662 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 BPIFB1Q8TDL5 484 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 NELL1Q92832 810 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 ANKRD36BP1Q96IX9 119 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 ACBD6Q9BR61 282 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 C2orf42Q9NWW7 574 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 GDAP2Q9NXN4 497 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 PCDHGA2Q9Y5H1 932 aa17.81■□□□□ 0.44
PTPRK-208ENST00000392449 ZNF233A6NK53 670 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 TADA3O75528 432 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 F13A1P00488 732 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 LMO2P25791 158 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 ID4P47928 161 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 CYP2J2P51589 502 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 PON2Q15165 354 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 ARHGAP29Q52LW3 1261 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 TRIM68Q6AZZ1 485 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 CMTM8Q8IZV2 173 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 TMEM86AQ8N2M4 240 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 IQUBQ8NA54 791 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 KBTBD7Q8WVZ9 684 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 RUBCNQ92622 972 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 HPDLQ96IR7 371 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 C7orf25Q9BPX7 421 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 CUEDC2Q9H467 287 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 AGPAT3Q9NRZ7 376 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 PCDHA7Q9UN72 937 aa17.8■□□□□ 0.44
PTPRK-208ENST00000392449 GABRDO14764 452 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 EIF3DO15371 548 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTPRK-208ENST00000392449 LILRB5O75023 590 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 AFMP43652 599 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 MYL7Q01449 175 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 DMWDQ09019 674 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 NFE2Q16621 373 aaPredicted RBP17.79■□□□□ 0.44
PTPRK-208ENST00000392449 STXBP4Q6ZWJ1 553 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 TOP6BLQ8N6T0 577 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 ZNF507Q8TCN5 953 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 LEO1Q8WVC0 666 aaPredicted RBP17.79■□□□□ 0.44
PTPRK-208ENST00000392449 SCFD1Q8WVM8 642 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 USP13Q92995 863 aaPredicted RBP17.79■□□□□ 0.44
PTPRK-208ENST00000392449 RMDN1Q96DB5 314 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 CHAMP1Q96JM3 812 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 LRRC27Q9C0I9 530 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 OBP2AQ9NY56 170 aa17.79■□□□□ 0.44
PTPRK-208ENST00000392449 SMG5Q9UPR3 1016 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms