RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 HMGA1P17096 107 aaKnown RBP7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 WARSP23381 471 aaKnown RBP7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 AVPR1AP37288 418 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 VIPR2P41587 438 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 ME1P48163 572 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 NLRP12P59046 1061 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 ENPEPQ07075 957 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 GRM2Q14416 872 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 PSMD6Q15008 389 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 PDGFRLQ15198 375 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 SNRNP35Q16560 246 aaKnown RBP7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 KNOP1Q1ED39 458 aaKnown RBP7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 RESP18Q5W5W9 173 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 FAM171BQ6P995 826 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 LRRTM3Q86VH5 581 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 MON1AQ86VX9 555 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 SPATA2LQ8IUW3 424 aaPredicted RBP7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 CEP57L1Q8IYX8 460 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 ADGRF2Q8IZF7 708 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 SPEM1Q8N4L4 309 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 FSIP1Q8NA03 581 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 DHX58Q96C10 678 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 SAAL1Q96ER3 474 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 HPDLQ96IR7 371 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 SPATA17Q96L03 361 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 TMEM209Q96SK2 561 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 PKMYT1Q99640 499 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 EPC1Q9H2F5 836 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 VRTNQ9H8Y1 702 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 PDE11AQ9HCR9 933 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 AGPAT3Q9NRZ7 376 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 ABI2Q9NYB9 513 aaPredicted RBP7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 SIX4Q9UIU6 781 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 ATP6V1DQ9Y5K8 247 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 SNX9Q9Y5X1 595 aa7.56□□□□□ -1.2
RNU1-56P-201ENST00000391303 CCDC163A0A0D9SF12 145 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 SPECC1L-ADORA2AF8WAN1 911 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 POLR2DO15514 142 aaKnown RBP7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 TGFB1I1O43294 461 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 ATG13O75143 517 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 F11P03951 625 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 KRT19P08727 400 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 CHRNB1P11230 501 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 GJA1P17302 382 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 CMA1P23946 247 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 CTHP32929 405 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 HOXD13P35453 343 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 CXCL12P48061 93 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 KPNA1P52294 538 aaPredicted RBP7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 CLDN10P78369 228 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 CSTF1Q05048 431 aaKnown RBP7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 FAM160A1Q05DH4 1040 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 BFSP1Q12934 665 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 SOWAHAQ2M3V2 549 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 ITPRIPL2Q3MIP1 535 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 FBXO43Q4G163 708 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 TRAPPC11Q7Z392 1133 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 CBWD2Q8IUF1 395 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 TTC9BQ8N6N2 239 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 SUMF1Q8NBK3 374 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 SCFD1Q8WVM8 642 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 SYAP1Q96A49 352 aaPredicted RBP7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 CCDC34Q96HJ3 373 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 CGRRF1Q99675 332 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 FAM83CQ9BQN1 747 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 SLC46A2Q9BY10 475 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 MTMR12Q9C0I1 747 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 LMAN1LQ9HAT1 526 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 TDP1Q9NUW8 608 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 PCDHA7Q9UN72 937 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 MTF2Q9Y483 593 aaPredicted RBP7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 C5orf42Q9H799 3197 aa7.55□□□□□ -1.2
RNU1-56P-201ENST00000391303 FAM237AA0A1B0GTK4 181 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 GOLGA8IPA6NC78 632 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 GOLGA8JA6NMD2 632 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 PDXKO00764 312 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 IKBKBO14920 756 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 TRIM66O15016 1216 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 MAPK13O15264 365 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 LRP3O75074 770 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 LRRN2O75325 713 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 RPN1P04843 607 aaKnown RBP7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 USP17L7P0C7H9 530 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 TDGF1P13385 188 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 P4HA1P13674 534 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 TNNI1P19237 187 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 CD72P21854 359 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 CCNE1P24864 410 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 WNT7BP56706 349 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 NOP14P78316 857 aaKnown RBP7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 KRT85P78386 507 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 CYP24A1Q07973 514 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 MTAPQ13126 283 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 TRPC3Q13507 836 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 RUNX3Q13761 415 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 CCINQ13939 588 aa7.54□□□□□ -1.2
RNU1-56P-201ENST00000391303 NFIL3Q16649 462 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms