RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 RASA3Q14644 834 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 TBCCQ15814 346 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 PRAMEF19Q5SWL8 479 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 RBM20Q5T481 1227 aaKnown RBP0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 AFMIDQ63HM1 303 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 EGFLAMQ63HQ2 1017 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 OTUD7BQ6GQQ9 843 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 ANO7Q6IWH7 933 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 LMBR1LQ6UX01 489 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 RFX8Q6ZV50 586 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 Q6ZVH6 145 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 PHYKPLQ8IUZ5 450 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 SLC15A3Q8IY34 581 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 TRMT2AQ8IZ69 625 aaKnown RBP0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 FITM2Q8N6M3 262 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 OSR1Q8TAX0 266 aaPredicted RBP0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 PNISRQ8TF01 805 aaKnown RBP0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 ATRIPQ8WXE1 791 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 PTPRN2Q92932 1015 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 RTP4Q96DX8 246 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 SGSM3Q96HU1 749 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 SPATA32Q96LK8 384 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 SNX18Q96RF0 628 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 UHRF1Q96T88 793 aaPredicted RBP0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 PKP4Q99569 1192 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 SF3B5Q9BWJ5 86 aaKnown RBP0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 BOCQ9BWV1 1114 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 SEZ6LQ9BYH1 1024 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 RBM38Q9H0Z9 239 aaKnown RBP0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 RETREG1Q9H6L5 497 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 DDX31Q9H8H2 851 aaKnown RBP0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 ARHGEF4Q9NR80 690 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 THSD1Q9NS62 852 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 LIMCH1Q9UPQ0 1083 aa0.2□□□□□ -2.38
TRAJ53-201ENST00000390485 ZNF814B7Z6K7 855 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 TMEM232C9JQI7 657 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 E7ENX8 843 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 BUB3O43684 328 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 HOXC6P09630 235 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 ATP5JP18859 108 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 PTPN7P35236 360 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 PXNP49023 591 aaPredicted RBP0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 SCNN1BP51168 640 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 KIF11P52732 1056 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 LGALS4P56470 323 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 NRG3P56975 720 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 TAP2Q03519 686 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 PPATQ06203 517 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 ODF3L2Q3SX64 289 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 ZNF529Q6P280 563 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 ABHD17CQ6PCB6 329 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 FAM83HQ6ZRV2 1179 aaPredicted RBP0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 ANKS3Q6ZW76 656 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 MCF2L2Q86YR7 1114 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 AMER3Q8N944 861 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 ZNF480Q8WV37 535 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 GAB3Q8WWW8 586 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 SCMH1Q96GD3 660 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 SEC16BQ96JE7 1060 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 THAP7Q9BT49 309 aaPredicted RBP0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 C1QTNF4Q9BXJ3 329 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 AMBRA1Q9C0C7 1298 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 ABHD16BQ9H3Z7 469 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 MANSC1Q9H8J5 431 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 TMEM248Q9NWD8 314 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 PLK2Q9NYY3 685 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 PLEKHB1Q9UF11 243 aaPredicted RBP0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 SLC23A1Q9UHI7 598 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 ADAM18Q9Y3Q7 739 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 PCDHA9Q9Y5H5 950 aa0.19□□□□□ -2.38
TRAJ53-201ENST00000390485 SPATA31A3Q5VYP0 1347 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 A0A0B4J269 797 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 NDUFB8O95169 186 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 APOL3O95236 402 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 EGFP01133 1207 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 PFKMP08237 780 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 SNRNP70P08621 437 aaKnown RBP0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 XPAP23025 273 aaPredicted RBP0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 SP100P23497 879 aaPredicted RBP0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 CTSSP25774 331 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 PTX3P26022 381 aaPredicted RBP0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 NPTX2P47972 431 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 KCNJ4P48050 445 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 PDLIM4P50479 330 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 HLCSP50747 726 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 RENBPP51606 427 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 MC2RQ01718 297 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 ACSM2AQ08AH3 577 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 DMP1Q13316 513 aaPredicted RBP0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 TUBB3Q13509 450 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 FAM187BQ17R55 369 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 ZNF750Q32MQ0 723 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 PREPLQ4J6C6 727 aaPredicted RBP0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 TEDDM1Q5T9Z0 273 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 IGFL3Q6UXB1 125 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 SEM1Q6ZVN7 128 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 ZNF771Q7L3S4 317 aaPredicted RBP0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 SMIM29Q86T20 159 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 LIX1LQ8IVB5 337 aa0.18□□□□□ -2.38
TRAJ53-201ENST00000390485 GLB1L2Q8IW92 636 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms