RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PSMA4P25789 261 aaKnown RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 KLRC1P26715 233 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 IL1R2P27930 398 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 DPP6P42658 865 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 BCAT1P54687 386 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 NRG3P56975 720 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 ZNF200P98182 395 aaPredicted RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 EXOSC9Q06265 439 aaKnown RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 CTBP1Q13363 440 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 MPP3Q13368 585 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 PRPF4BQ13523 1007 aaKnown RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 ZNF787Q6DD87 383 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 ATF7IPQ6VMQ6 1270 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 FAM129CQ86XR2 697 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 NUP93Q8N1F7 819 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 MFSD4AQ8N468 514 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 DCBLD1Q8N8Z6 715 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 FBLIM1Q8WUP2 373 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 RUFY2Q8WXA3 655 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 RSC1A1Q92681 617 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 IWS1Q96ST2 819 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 METTL22Q9BUU2 404 aaPredicted RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 C1orf43Q9BWL3 253 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 YIPF2Q9BWQ6 316 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 PCDHAC1Q9H158 963 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 RABEP2Q9H5N1 569 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 A1CFQ9NQ94 594 aaKnown RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 BTBD7Q9P203 1132 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 MYOTQ9UBF9 498 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 RGS17Q9UGC6 210 aaPredicted RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 CHORDC1Q9UHD1 332 aaPredicted RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 XPO7Q9UIA9 1087 aaKnown RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 ZMYND8Q9ULU4 1186 aaPredicted RBP7.05□□□□□ -1.28
TRAV35-201ENST00000390462 DERAQ9Y315 318 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 RWDD3Q9Y3V2 267 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 LTBP4Q8N2S1 1624 aa7.05□□□□□ -1.28
TRAV35-201ENST00000390462 MED1Q15648 1581 aaPredicted RBP7.04□□□□□ -1.28
TRAV35-201ENST00000390462 NFIBO00712 420 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 VILLO15195 856 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 TSPAN3O60637 253 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 KRT38O76015 456 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 GLP2RO95838 553 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 PLATP00750 562 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 CELA2BP08218 269 aaPredicted RBP7.04□□□□□ -1.28
TRAV35-201ENST00000390462 MLLT6P55198 1093 aaPredicted RBP7.04□□□□□ -1.28
TRAV35-201ENST00000390462 CC2D1BQ5T0F9 858 aaKnown RBP7.04□□□□□ -1.28
TRAV35-201ENST00000390462 FYB2Q5VWT5 728 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 RAP1GAP2Q684P5 730 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 CNSTQ6PJW8 725 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 LYPD4Q6UWN0 246 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 BTN2A1Q7KYR7 527 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 THAP5Q7Z6K1 395 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 SLFN11Q7Z7L1 901 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 KRT73Q86Y46 540 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 UNC45BQ8IWX7 931 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 TRIM48Q8IWZ4 208 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 RTKN2Q8IZC4 609 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 USP38Q8NB14 1042 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 OR56A3Q8NH54 315 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 GIMAP7Q8NHV1 300 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 EZH1Q92800 747 aaPredicted RBP7.04□□□□□ -1.28
TRAV35-201ENST00000390462 KCNN1Q92952 543 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 HIST1H2AHQ96KK5 128 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 NOX5Q96PH1 765 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 HIST1H2AJQ99878 128 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 PI4K2AQ9BTU6 479 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 HEYLQ9NQ87 328 aaPredicted RBP7.04□□□□□ -1.28
TRAV35-201ENST00000390462 G6PC2Q9NQR9 355 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 UCKL1Q9NWZ5 548 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 MORF4L1Q9UBU8 362 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 DTNAQ9Y4J8 743 aa7.04□□□□□ -1.28
TRAV35-201ENST00000390462 RPTORQ8N122 1335 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 CTTNBP2Q8WZ74 1663 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 E7EVH7 732 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 F2RL2O00254 374 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 SH2B2O14492 632 aaPredicted RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 GAS2O43903 313 aaKnown RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 WFS1O76024 890 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 SEC24DO94855 1032 aaPredicted RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 F9P00740 461 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 TPM2P07951 284 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 FOSL1P15407 271 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 ADSLP30566 484 aaPredicted RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 PSMC2P35998 433 aaKnown RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 HADHAP40939 763 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 PREPP48147 710 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 HSD17B7P56937 341 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 PSMC1P62191 440 aaKnown RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 RBP5P82980 135 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 MGAT5Q09328 741 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 AP1B1Q10567 949 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 TFCP2Q12800 502 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 BFSP1Q12934 665 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 HABP2Q14520 560 aaPredicted RBP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 PUM1Q14671 1186 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRAV35-201ENST00000390462 SEC23BQ15437 767 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 KRTCAP3Q53RY4 240 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 RAB11FIP2Q7L804 512 aa7.03□□□□□ -1.28
TRAV35-201ENST00000390462 YAF2Q8IY57 180 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms