RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 SYNRGQ9UMZ2 1314 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 KDM3AQ9Y4C1 1321 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 hCG_2014768A0A024R1R8 64 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 GSTTP1A0A1W2PQM5 241 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 C5orf60A6NFR6 353 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 C9IYK1 514 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 DNAJC6O75061 913 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 DNAJC8O75937 253 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 ASMTLO95671 621 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 PGK1P00558 417 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 MYL1P05976 194 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 C6orf222P0C671 652 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 CCL5P13501 91 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 RPA1P27694 616 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 CYLC1P35663 651 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 TCF7P36402 384 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 QARSP47897 775 aaKnown RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 VAV2P52735 878 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 NAP1L1P55209 391 aaKnown RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 GJA9P57773 515 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 PSMC5P62195 406 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 GNGT1P63211 74 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 IGBP1P78318 339 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 CYP4A11Q02928 519 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 BIRC3Q13489 604 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 CTTNQ14247 550 aaKnown RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 CBX2Q14781 532 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 CMPK2Q5EBM0 449 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 FIGNQ5HY92 759 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 RNF187Q5TA31 235 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 FAM160B1Q5W0V3 765 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 AP1ARQ63HQ0 302 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 SWSAP1Q6NVH7 229 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 C6orf89Q6UWU4 347 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 ABHD15Q6UXT9 468 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 USP49Q70CQ1 688 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 CCDC60Q8IWA6 550 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 SLC35F6Q8N357 371 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 TRIM58Q8NG06 486 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 NOC3LQ8WTT2 800 aaKnown RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 N4BP2L2Q92802 583 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 GLG1Q92896 1179 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 ITFG2Q969R8 447 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 CALML4Q96GE6 196 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 DYDC2Q96IM9 177 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 ZNF333Q96JL9 665 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 FANCD2OSQ96PS1 177 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 HSD17B14Q9BPX1 270 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 LXNQ9BS40 222 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 MMTAG2Q9BU76 263 aaKnown RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 POLR3CQ9BUI4 534 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 SPATA9Q9BWV2 254 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 TMPRSS13Q9BYE2 586 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 RNF208Q9H0X6 261 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 PAK6Q9NQU5 681 aaPredicted RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 ZNF302Q9NR11 478 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 RGL1Q9NZL6 768 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 GABBR1Q9UBS5 961 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 CTNNAL1Q9UBT7 734 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 LIMA1Q9UHB6 759 aaKnown RBP8.02□□□□□ -1.13
TRBV28-201ENST00000390400 KCNH3Q9ULD8 1083 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 TELO2Q9Y4R8 837 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 HTTP42858 3142 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 EMSYQ7Z589 1322 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 IGSF9BQ9UPX0 1349 aa8.02□□□□□ -1.13
TRBV28-201ENST00000390400 LOXHD1Q8IVV2 1947 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 IGKV6D-21A0A0A0MT36 114 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 AGPSO00116 658 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 CES2O00748 559 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 KPNA6O60684 536 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 DKC1O60832 514 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRBV28-201ENST00000390400 N4BP1O75113 896 aaKnown RBP8.01□□□□□ -1.13
TRBV28-201ENST00000390400 MED24O75448 989 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 LYPLA2O95372 231 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 LGALS2P05162 132 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 MYL3P08590 195 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 ZNF286BP0CG31 522 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 SPATA31C1P0DKV0 1188 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 MUTP22033 750 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 CST5P28325 142 aaPredicted RBP8.01□□□□□ -1.13
TRBV28-201ENST00000390400 STAT6P42226 847 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 STAT5BP51692 787 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 NKX3-2P78367 333 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 BEX3Q00994 111 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 PRKCEQ02156 737 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 ID3Q02535 119 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 SLBPQ14493 270 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRBV28-201ENST00000390400 KARSQ15046 597 aaKnown RBP8.01□□□□□ -1.13
TRBV28-201ENST00000390400 MEA1Q16626 185 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 UGCGQ16739 394 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 TMEM119Q4V9L6 283 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 HYIQ5T013 277 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 TDRD10Q5VZ19 366 aaKnown RBP8.01□□□□□ -1.13
TRBV28-201ENST00000390400 RRAGBQ5VZM2 374 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 CCDC121Q6ZUS5 278 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 CACNA2D4Q7Z3S7 1137 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 SDCCAG8Q86SQ7 713 aaPredicted RBP8.01□□□□□ -1.13
TRBV28-201ENST00000390400 RNF180Q86T96 592 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 CATSPER3Q86XQ3 398 aa8.01□□□□□ -1.13
TRBV28-201ENST00000390400 TPH2Q8IWU9 490 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms