RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SPACA7Q96KW9 195 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 CNOT6LQ96LI5 555 aaKnown RBP10.45□□□□□ -0.74
IFT88-203ENST00000389373 DRC1Q96MC2 740 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 CYP2S1Q96SQ9 504 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 CCDC86Q9H6F5 360 aaKnown RBP10.45□□□□□ -0.74
IFT88-203ENST00000389373 ARHGAP28Q9P2N2 729 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 ZMYM5Q9UJ78 669 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 RBM19Q9Y4C8 960 aaKnown RBP10.45□□□□□ -0.74
IFT88-203ENST00000389373 THADAQ6YHU6 1953 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 ADAMTS20P59510 1910 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 NUP210Q8TEM1 1887 aaPredicted RBP10.44□□□□□ -0.74
IFT88-203ENST00000389373 E9PMD0 336 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 TULP1O00294 542 aaPredicted RBP10.44□□□□□ -0.74
IFT88-203ENST00000389373 TNFRSF10BO14763 440 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 PFKFB2O60825 505 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 OPHN1O60890 802 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 PRPF40AO75400 957 aaKnown RBP10.44□□□□□ -0.74
IFT88-203ENST00000389373 CLTAP09496 248 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 OR52Z1P0C646 297 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 HAPLN1P10915 354 aaPredicted RBP10.44□□□□□ -0.74
IFT88-203ENST00000389373 FDPSP14324 419 aaKnown RBP10.44□□□□□ -0.74
IFT88-203ENST00000389373 TNFSF9P41273 254 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 GPR15P49685 360 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 LILRA4P59901 499 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 RAD51AP2Q09MP3 1159 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 LYSMD4Q5XG99 296 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 HAUS3Q68CZ6 603 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 TMEM150AQ86TG1 271 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 MON1AQ86VX9 555 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 RASSF3Q86WH2 238 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 ABCA7Q8IZY2 2146 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 DAW1Q8N136 415 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 THEM5Q8N1Q8 247 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 PNPLA1Q8N8W4 532 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 NECAB1Q8N987 351 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 OR2I1PQ8NGU4 316 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 CCDC26Q8TAB7 109 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 MDM1Q8TC05 714 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 OSCP1Q8WVF1 389 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 ATP2A3Q93084 1043 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 BICD1Q96G01 975 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 CAMK1GQ96NX5 476 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 BBC3Q96PG8 261 aaPredicted RBP10.44□□□□□ -0.74
IFT88-203ENST00000389373 ZCWPW1Q9H0M4 648 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 PLEKHA5Q9HAU0 1116 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 HSFX1Q9UBD0 423 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 PCDHB9Q9Y5E1 797 aa10.44□□□□□ -0.74
IFT88-203ENST00000389373 FASNP49327 2511 aaKnown RBP10.43□□□□□ -0.74
IFT88-203ENST00000389373 ZZEF1O43149 2961 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 ASPMQ8IZT6 3477 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 TTC26A0AVF1 554 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 K7EQS6 105 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 CAPNS1P04632 268 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 CKMP06732 381 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 CYP3A5P20815 502 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 MUTP22033 750 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 ITPKAP23677 461 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 TIE1P35590 1138 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 P2RY2P41231 377 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 GUCY1B3Q02153 619 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 GFPT1Q06210 699 aaPredicted RBP10.43□□□□□ -0.74
IFT88-203ENST00000389373 MCL1Q07820 350 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 ZBTB6Q15916 424 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 CRY1Q16526 586 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 DUOXA1Q1HG43 343 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 ZNF423Q2M1K9 1284 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 SLC23A3Q6PIS1 610 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 TMEM92Q6UXU6 159 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 RAB44Q7Z6P3 723 aaPredicted RBP10.43□□□□□ -0.74
IFT88-203ENST00000389373 LRRTM3Q86VH5 581 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 EFCAB13Q8IY85 973 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 SPPL2BQ8TCT7 592 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 HMGB4Q8WW32 186 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 FNBP1Q96RU3 617 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 PYM1Q9BRP8 204 aaKnown RBP10.43□□□□□ -0.74
IFT88-203ENST00000389373 PI4K2AQ9BTU6 479 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 RUSC1Q9BVN2 902 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 TM6SF1Q9BZW5 370 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 HAPLN2Q9GZV7 340 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 LINC00597Q9H2U6 94 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 RPF1Q9H9Y2 349 aaKnown RBP10.43□□□□□ -0.74
IFT88-203ENST00000389373 POLMQ9NP87 494 aaPredicted RBP10.43□□□□□ -0.74
IFT88-203ENST00000389373 LRWD1Q9UFC0 647 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 MMP17Q9ULZ9 603 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 SLC6A14Q9UN76 642 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 DNM3Q9UQ16 869 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 NUP205Q92621 2012 aa10.43□□□□□ -0.74
IFT88-203ENST00000389373 TRAV19A0A0A6YYK7 116 aa10.42□□□□□ -0.74
IFT88-203ENST00000389373 FAM221BA6H8Z2 402 aa10.42□□□□□ -0.74
IFT88-203ENST00000389373 UPK3BL1B0FP48 263 aa10.42□□□□□ -0.74
IFT88-203ENST00000389373 UPK3BL2E5RIL1 263 aa10.42□□□□□ -0.74
IFT88-203ENST00000389373 CYB561D2O14569 222 aa10.42□□□□□ -0.74
IFT88-203ENST00000389373 SH3BP5O60239 455 aa10.42□□□□□ -0.74
IFT88-203ENST00000389373 KLF8O95600 359 aaPredicted RBP10.42□□□□□ -0.74
IFT88-203ENST00000389373 USP17L7P0C7H9 530 aa10.42□□□□□ -0.74
IFT88-203ENST00000389373 CSH1P0DML2 217 aa10.42□□□□□ -0.74
IFT88-203ENST00000389373 CSH2P0DML3 217 aa10.42□□□□□ -0.74
IFT88-203ENST00000389373 HNRNPLP14866 589 aaKnown RBP eCLIP10.42□□□□□ -0.74
IFT88-203ENST00000389373 HMGA1P17096 107 aaKnown RBP10.42□□□□□ -0.74
IFT88-203ENST00000389373 SMTNP53814 917 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms