RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SURF1Q15526 300 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 CMTM5Q96DZ9 223 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 CNBD2Q96M20 576 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 MID2Q9UJV3 735 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 GOLGA8QA0A0J9YX86 632 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 GOLGA8OA6NCC3 632 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 MEI4A8MW99 385 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 GOLGA8NF8WBI6 632 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 POLRMTO00411 1230 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 BANF1O75531 89 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 DGAT1O75907 488 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 TAC1P20366 129 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 YY1P25490 414 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 IYDQ6PHW0 289 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 MFN1Q8IWA4 741 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 EME1Q96AY2 570 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 OXNAD1Q96HP4 312 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 CLMNQ96JQ2 1002 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 SAE1Q9UBE0 346 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 AKT3Q9Y243 479 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 RPTORQ8N122 1335 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 CCDC78A2IDD5 438 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 DPPA5A6NC42 116 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 APOL1O14791 398 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 RGS7P49802 495 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 CCDC33Q8N5R6 958 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 DTNAQ9Y4J8 743 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 AFG3L2Q9Y4W6 797 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 SPATA31C1P0DKV0 1188 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 CIITAP33076 1130 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 AP1B1Q10567 949 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 TMPRSS6Q8IU80 811 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 SULF1Q8IWU6 871 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZCCHC9Q8N567 271 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 AGAP3Q96P47 875 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZCWPW1Q9H0M4 648 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 TAGLN3Q9UI15 199 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 TNS2Q63HR2 1409 aa13.73□□□□□ -0.21
TRAPPC9-201ENST00000389328 TNFAIP1Q13829 316 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 C16orf87Q6PH81 154 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 OR6B3Q8NGW1 331 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 HAUS8Q9BT25 410 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 DRC3Q9H069 523 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 SAR1AQ9NR31 198 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 FBXO6Q9NRD1 293 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 A0A1W2PPM1 405 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 TM9SF1O15321 606 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 VCPP55072 806 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 PRPSAP1Q14558 356 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 TRMT5Q32P41 509 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 GRAMD4Q6IC98 578 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 LLGL2Q6P1M3 1020 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 SP8Q8IXZ3 490 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 RYBPQ8N488 228 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 EMC1Q8N766 993 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZSWIM2Q8NEG5 633 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 EXT2Q93063 718 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 FAM84AQ96KN4 292 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 CCDC138Q96M89 665 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 AJAP1Q9UKB5 411 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 IVNS1ABPQ9Y6Y0 642 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 DDTLA6NHG4 134 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 ELK3P41970 407 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 ORC1Q13415 861 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 PDK4Q16654 411 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 RNF220Q5VTB9 566 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 SNRNP48Q6IEG0 339 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZNF384Q8TF68 577 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 MYH10P35580 1976 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 ATP9BO43861 1147 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 AHCYL1O43865 530 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 SPAG6O75602 509 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 MMP10P09238 476 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 FOXR2Q6PJQ5 311 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 HHIPL2Q6UWX4 724 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 ARHGAP22Q7Z5H3 698 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 TIPINQ9BVW5 301 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZNF302Q9NR11 478 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 GRHL1Q9NZI5 618 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 GRID1Q9ULK0 1009 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 DNAJC16Q9Y2G8 782 aa13.72□□□□□ -0.21
TRAPPC9-201ENST00000389328 PDE5AO76074 875 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 FMO1Q01740 532 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 ROR2Q01974 943 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 FAAP100Q0VG06 881 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 BLMHQ13867 455 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 CYLC2Q14093 348 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 MFSD5Q6N075 450 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 OTOAQ7RTW8 1153 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 CDKL3Q8IVW4 592 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 PCDHB18PQ96TA0 734 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 AS3MTQ9HBK9 375 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 NMRK1Q9NWW6 199 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 PAK5Q9P286 719 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 SLC12A4Q9UP95 1085 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 SHOC2Q9UQ13 582 aa13.71□□□□□ -0.21
TRAPPC9-201ENST00000389328 FAM237BA0A1B0GVD1 139 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms