RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 DHX36Q9H2U1 1008 aaKnown RBP6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 AGO4Q9HCK5 861 aaKnown RBP6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 TRPM5Q9NZQ8 1165 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 LRFN1Q9P244 771 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 SORCS3Q9UPU3 1222 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 FAM234BA2RU67 622 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 PIP5K1CO60331 668 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 SCAF4O95104 1147 aaKnown RBP6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 HLA-DOAP06340 250 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 KCNA2P16389 499 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 FGFR4P22455 802 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 GCLCP48506 637 aaPredicted RBP6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 CCT5P48643 541 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 COPAP53621 1224 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 TMEM95Q3KNT9 176 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 ZACNQ401N2 412 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 SPDYE7PQ495Y7 208 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 C1QL3Q5VWW1 255 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 TAF2Q6P1X5 1199 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 TLDC1Q6P9B6 456 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 GDF7Q7Z4P5 450 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 NKAPQ8N5F7 415 aaKnown RBP6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 VGLL2Q8N8G2 317 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 NSUN7Q8NE18 718 aaKnown RBP6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 CYP2W1Q8TAV3 490 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 ZSWIM1Q9BR11 485 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 MESP1Q9BRJ9 268 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 DEF6Q9H4E7 631 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 XPNPEP3Q9NQH7 507 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 MRPS18AQ9NVS2 196 aaKnown RBP6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 TCAF1Q9Y4C2 921 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 NOX1Q9Y5S8 564 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 AATKQ6ZMQ8 1374 aa6.41□□□□□ -1.38
RNU6-40P-201ENST00000384254 E7ENX8 843 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 H7C4K7 107 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 RGS10O43665 173 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 RPS6KA4O75676 772 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 RASAL1O95294 804 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 NDST3O95803 873 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 A1BGP04217 495 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 BTF3P20290 206 aaKnown RBP6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 PTDSS1P48651 473 aaKnown RBP6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 SCNN1GP51170 649 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 PRKAG1P54619 331 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 LILRA4P59901 499 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 TAP2Q03519 686 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 TUBB8Q3ZCM7 444 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 ERICH6BQ5W0A0 696 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 ARL6IP4Q66PJ3 421 aaKnown RBP6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 ZDHHC24Q6UX98 284 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 MAMDC4Q6UXC1 1216 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 KRT28Q7Z3Y7 464 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 MAPKAPK5Q8IW41 473 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 SPARTQ8N0X7 666 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 ATG16L2Q8NAA4 619 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 POC1BQ8TC44 478 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 Q8TCH9 128 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 ADOQ96SZ5 270 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 RMDN3Q96TC7 470 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 NEU1Q99519 415 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 FAM83DQ9H4H8 585 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 NECTIN3Q9NQS3 549 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 LUZP4Q9P127 313 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 KCNE5Q9UJ90 142 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 FPGT-TNNI3KV9GXZ4 949 aa6.4□□□□□ -1.38
RNU6-40P-201ENST00000384254 PRICKLE3O43900 615 aaPredicted RBP6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 PIAS2O75928 621 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 ANXA11P50995 505 aaKnown RBP6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 ITGA8P53708 1063 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 OCA2Q04671 838 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 PFKFB4Q16877 469 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 PDCD4Q53EL6 469 aaKnown RBP6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 PLAG1Q6DJT9 500 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 SFRP4Q6FHJ7 346 aaPredicted RBP6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 MZT2AQ6P582 158 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 TMEM108Q6UXF1 575 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 KRT73Q86Y46 540 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 CHST13Q8NET6 341 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 CPT1CQ8TCG5 803 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 ZCWPW1Q9H0M4 648 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 OBP2BQ9NPH6 170 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 AURKAIP1Q9NWT8 199 aaPredicted RBP6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 DACT1Q9NYF0 836 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 RGL1Q9NZL6 768 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 HSFX1Q9UBD0 423 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 TBC1D30Q9Y2I9 924 aa6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.39□□□□□ -1.39
RNU6-40P-201ENST00000384254 MYADML2A6NDP7 307 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 DCLK1O15075 740 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 ZNF185O15231 689 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 TLR5O60602 858 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 PDIA3P30101 505 aaKnown RBP6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 NDUFV1P49821 464 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 RPS7P62081 194 aaKnown RBP6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 FPGSQ05932 587 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 FSTL1Q12841 308 aa6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 BOP1Q14137 746 aaKnown RBP6.38□□□□□ -1.39
RNU6-40P-201ENST00000384254 RRP1BQ14684 758 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms