RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 SECISBP2LQ93073 1101 aaKnown RBP13.96□□□□□ -0.17
RPAIN-202ENST00000381208 TRIM9Q9C026 710 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 ABI2Q9NYB9 513 aaPredicted RBP13.96□□□□□ -0.17
RPAIN-202ENST00000381208 UXTQ9UBK9 157 aaPredicted RBP13.96□□□□□ -0.17
RPAIN-202ENST00000381208 NDRG2Q9UN36 371 aaKnown RBP13.96□□□□□ -0.17
RPAIN-202ENST00000381208 A0A087X0B3 334 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 NRG2O14511 850 aaPredicted RBP13.96□□□□□ -0.18
RPAIN-202ENST00000381208 PRPF6O94906 941 aaKnown RBP13.96□□□□□ -0.18
RPAIN-202ENST00000381208 TNNC2P02585 160 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 HSP90AA1P07900 732 aaKnown RBP13.96□□□□□ -0.18
RPAIN-202ENST00000381208 ATF6P18850 670 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 KPNA1P52294 538 aaPredicted RBP13.96□□□□□ -0.18
RPAIN-202ENST00000381208 ASIC1P78348 528 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 BFSP1Q12934 665 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 E2F4Q16254 413 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 DUOXA2Q1HG44 320 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 LRRTM3Q86VH5 581 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 ZNF687Q8N1G0 1237 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 PDCL2Q8N4E4 241 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 TTC9BQ8N6N2 239 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 GPR161Q8N6U8 529 aaKnown RBP13.96□□□□□ -0.18
RPAIN-202ENST00000381208 CELF5Q8N6W0 485 aaKnown RBP13.96□□□□□ -0.18
RPAIN-202ENST00000381208 BPIFB1Q8TDL5 484 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 NELL1Q92832 810 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 FUBP3Q96I24 572 aaKnown RBP eCLIP13.96□□□□□ -0.18
RPAIN-202ENST00000381208 HINFPQ9BQA5 517 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 MKNK1Q9BUB5 465 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 IKZF4Q9H2S9 585 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 KIF9Q9HAQ2 790 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 LMAN1LQ9HAT1 526 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 UBE4BO95155 1302 aa13.96□□□□□ -0.18
RPAIN-202ENST00000381208 GPR179Q6PRD1 2367 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 MYBPHLA2RUH7 354 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 SHISA7A6NL88 538 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 TULP1O00294 542 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-202ENST00000381208 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
RPAIN-202ENST00000381208 SOAT2O75908 522 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 KRT19P08727 400 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 AVPR1AP37288 418 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 MTAPQ13126 283 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 MAPRE1Q15691 268 aaKnown RBP13.95□□□□□ -0.18
RPAIN-202ENST00000381208 INTS6LQ5JSJ4 861 aaKnown RBP13.95□□□□□ -0.18
RPAIN-202ENST00000381208 DGKKQ5KSL6 1271 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 ERMP1Q7Z2K6 904 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 SYNPOQ8N3V7 929 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 NOC3LQ8WTT2 800 aaKnown RBP13.95□□□□□ -0.18
RPAIN-202ENST00000381208 MRPS31Q92665 395 aaKnown RBP13.95□□□□□ -0.18
RPAIN-202ENST00000381208 CEP295NLQ96MC4 621 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 C7orf25Q9BPX7 421 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 LPIN3Q9BQK8 851 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 PCIF1Q9H4Z3 704 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 IL21Q9HBE4 155 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 PDE11AQ9HCR9 933 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 INTS13Q9NVM9 706 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 DDX43Q9NXZ2 648 aaKnown RBP13.95□□□□□ -0.18
RPAIN-202ENST00000381208 CGNQ9P2M7 1197 aaKnown RBP13.95□□□□□ -0.18
RPAIN-202ENST00000381208 CFAP45Q9UL16 551 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 L1RE1Q9UN81 338 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 SNX9Q9Y5X1 595 aa13.95□□□□□ -0.18
RPAIN-202ENST00000381208 FANCMQ8IYD8 2048 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 GOLGA8IPA6NC78 632 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 GOLGA8JA6NMD2 632 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 CHRNB1P11230 501 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 CCNE1P24864 410 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 ID4P47928 161 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 AMPD2Q01433 879 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 CFAP221Q4G0U5 840 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 FAM26FQ5R3K3 315 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 STXBP5Q5T5C0 1151 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 UNC13DQ70J99 1090 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 HS2ST1Q7LGA3 356 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 WDR49Q8IV35 697 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 ADGRF2Q8IZF7 708 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 CMTM8Q8IZV2 173 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 SPEM1Q8N4L4 309 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 SUMF1Q8NBK3 374 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 CXorf38Q8TB03 319 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 ZNF507Q8TCN5 953 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 GIPC2Q8TF65 315 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 RNF166Q96A37 237 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-202ENST00000381208 EXOC4Q96A65 974 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 DHX58Q96C10 678 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 MTMR12Q9C0I1 747 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 FAM13BQ9NYF5 915 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 HSPBP1Q9NZL4 362 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 TFIP11Q9UBB9 837 aaKnown RBP13.94□□□□□ -0.18
RPAIN-202ENST00000381208 ANK1P16157 1881 aa13.94□□□□□ -0.18
RPAIN-202ENST00000381208 GABRDO14764 452 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 LILRB5O75023 590 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 F11P03951 625 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 ZSCAN22P10073 491 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-202ENST00000381208 HMGA1P17096 107 aaKnown RBP13.93□□□□□ -0.18
RPAIN-202ENST00000381208 CTHP32929 405 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 CXCL12P48061 93 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 NLRP12P59046 1061 aa13.93□□□□□ -0.18
RPAIN-202ENST00000381208 ZNF268Q14587 947 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-202ENST00000381208 SPATA2LQ8IUW3 424 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms