RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 EPS8L1Q8TE68 723 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 DCLK3Q9C098 648 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 IQCGQ9H095 443 aaKnown RBP14.56□□□□□ -0.08
SDC1-202ENST00000381150 LRRC19Q9H756 370 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 GALNT8Q9NY28 637 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 IKBKGQ9Y6K9 419 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 TP73O15350 636 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 PGM3O95394 542 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 MCCD1P59942 119 aaPredicted RBP14.56□□□□□ -0.08
SDC1-202ENST00000381150 CCDC15Q0P6D6 951 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 TMED1Q13445 227 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 CNPY1Q3B7I2 92 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 STXBP4Q6ZWJ1 553 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 ALYREFQ86V81 257 aaKnown RBP14.56□□□□□ -0.08
SDC1-202ENST00000381150 MCF2L2Q86YR7 1114 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 SH3TC2Q8TF17 1288 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 HIC2Q96JB3 615 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 TSSK1BQ9BXA7 367 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 TMEM120AQ9BXJ8 343 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 GINM1Q9NU53 330 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 DDX18Q9NVP1 670 aaKnown RBP14.56□□□□□ -0.08
SDC1-202ENST00000381150 MAP3K20Q9NYL2 800 aaKnown RBP14.56□□□□□ -0.08
SDC1-202ENST00000381150 RLFQ13129 1914 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 ADGRA3Q8IWK6 1321 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 MEI4A8MW99 385 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 MAPTP10636 758 aaKnown RBP14.56□□□□□ -0.08
SDC1-202ENST00000381150 MYL2P10916 166 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 ALAS1P13196 640 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 SGSM1Q2NKQ1 1148 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 BBS9Q3SYG4 887 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 LMBRD2Q68DH5 695 aaPredicted RBP14.56□□□□□ -0.08
SDC1-202ENST00000381150 RASSF3Q86WH2 238 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 CPXCR1Q8N123 301 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 RIBC1Q8N443 379 aaPredicted RBP14.56□□□□□ -0.08
SDC1-202ENST00000381150 C11orf70Q9BRQ4 267 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 ETNK2Q9NVF9 386 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 NDE1Q9NXR1 346 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 TAS2R1Q9NYW7 299 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 WDR81Q562E7 1941 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 FAM237BA0A1B0GVD1 139 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 ATP2A1O14983 1001 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 ALDH18A1P54886 795 aaKnown RBP14.55□□□□□ -0.08
SDC1-202ENST00000381150 RPS6P62753 249 aaKnown RBP14.55□□□□□ -0.08
SDC1-202ENST00000381150 BTKQ06187 659 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 PGM5Q15124 567 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 C1orf220Q5T0J3 134 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 RGS9BPQ6ZS82 235 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 EFCAB3Q8N7B9 438 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 ITFG2Q969R8 447 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 FAM111AQ96PZ2 611 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 CYP4F11Q9HBI6 524 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 TOPORSQ9NS56 1045 aaPredicted RBP14.55□□□□□ -0.08
SDC1-202ENST00000381150 CHCHD3Q9NX63 227 aaKnown RBP14.55□□□□□ -0.08
SDC1-202ENST00000381150 BRCA1P38398 1863 aaKnown RBP14.55□□□□□ -0.08
SDC1-202ENST00000381150 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.55□□□□□ -0.08
SDC1-202ENST00000381150 GSTA2P09210 222 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 BGNP21810 368 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 TFDP1Q14186 410 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 SMAD1Q15797 465 aaKnown RBP14.55□□□□□ -0.08
SDC1-202ENST00000381150 UGCGQ16739 394 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 CTAGE3PQ8IX95 158 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 ENDOVQ8N8Q3 282 aaKnown RBP14.55□□□□□ -0.08
SDC1-202ENST00000381150 PYDC1Q8WXC3 89 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 MANSC1Q9H8J5 431 aa14.55□□□□□ -0.08
SDC1-202ENST00000381150 ASTN2O75129 1339 aaPredicted RBP14.55□□□□□ -0.08
SDC1-202ENST00000381150 SERPINB6P35237 376 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 QARSP47897 775 aaKnown RBP14.54□□□□□ -0.08
SDC1-202ENST00000381150 C12orf56Q8IXR9 622 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 PALM2Q8IXS6 379 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 SAMD3Q8N6K7 520 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 USP6NLQ92738 828 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 CENPKQ9BS16 269 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 SAE1Q9UBE0 346 aaPredicted RBP14.54□□□□□ -0.08
SDC1-202ENST00000381150 LNPEPQ9UIQ6 1025 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 TMEM150BA6NC51 233 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 MTMR1Q13613 665 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 KIF22Q14807 665 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 SLC45A4Q5BKX6 768 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 DEFB132Q7Z7B7 95 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 CEP70Q8NHQ1 597 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 FBXO27Q8NI29 283 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 SLC26A7Q8TE54 656 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 PYROXD1Q8WU10 500 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 FAM136AQ96C01 138 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 WNK4Q96J92 1243 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 OSBPL8Q9BZF1 889 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 ST6GALNAC4Q9H4F1 302 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 PIM2Q9P1W9 311 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 ZWINTO95229 277 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 CCNE2O96020 404 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 SPATA31D3P0C874 917 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 CYP11B1P15538 503 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 IVDP26440 423 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 GTF2BQ00403 316 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 DSG1Q02413 1049 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 SPATA31D4Q6ZUB0 917 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 SLC16A10Q8TF71 515 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 PTPRN2Q92932 1015 aa14.54□□□□□ -0.08
SDC1-202ENST00000381150 OR6B1O95007 311 aa14.53□□□□□ -0.08
SDC1-202ENST00000381150 ATP6V1B1P15313 513 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms