RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 DNAJC25Q9H1X3 360 aa20.71■□□□□ 0.91
GTF3A-201ENST00000381140 DPEP3Q9H4B8 488 aa20.71■□□□□ 0.91
GTF3A-201ENST00000381140 THAP9Q9H5L6 903 aa20.71■□□□□ 0.91
GTF3A-201ENST00000381140 MAGEC2Q9UBF1 373 aaPredicted RBP20.71■□□□□ 0.91
GTF3A-201ENST00000381140 DOCK8Q8NF50 2099 aa20.71■□□□□ 0.91
GTF3A-201ENST00000381140 CLUHO75153 1309 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 MYO10Q9HD67 2058 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 N4BP1O75113 896 aaKnown RBP20.7■□□□□ 0.9
GTF3A-201ENST00000381140 AFPP02771 609 aaKnown RBP20.7■□□□□ 0.9
GTF3A-201ENST00000381140 CD58P19256 250 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 ALDH1A3P47895 512 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 ZP2Q05996 745 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 KCNH2Q12809 1159 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 ORC1Q13415 861 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 NFE2Q16621 373 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-201ENST00000381140 ANO6Q4KMQ2 910 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 MDH1BQ5I0G3 518 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 CYP26C1Q6V0L0 522 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 RTL10Q7L3V2 364 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 IRF2BP1Q8IU81 584 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 SPATA2LQ8IUW3 424 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-201ENST00000381140 FAM114A1Q8IWE2 563 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 ELMOD1Q8N336 334 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 FAM200AQ8TCP9 573 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 SPPL2BQ8TCT7 592 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 RHOBTB2Q9BYZ6 727 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 RBSNQ9H1K0 784 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 CRTAC1Q9NQ79 661 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 PRKAG3Q9UGI9 489 aa20.7■□□□□ 0.9
GTF3A-201ENST00000381140 FAM163BP0C2L3 166 aa20.69■□□□□ 0.9
GTF3A-201ENST00000381140 CYP27A1Q02318 531 aa20.69■□□□□ 0.9
GTF3A-201ENST00000381140 SMARCB1Q12824 385 aa20.69■□□□□ 0.9
GTF3A-201ENST00000381140 CT47A1Q5JQC4 288 aaPredicted RBP20.69■□□□□ 0.9
GTF3A-201ENST00000381140 GET4Q7L5D6 327 aaPredicted RBP20.69■□□□□ 0.9
GTF3A-201ENST00000381140 C2orf15Q8WU43 125 aaKnown RBP20.69■□□□□ 0.9
GTF3A-201ENST00000381140 TATDN2Q93075 761 aa20.69■□□□□ 0.9
GTF3A-201ENST00000381140 MYLPFQ96A32 169 aa20.69■□□□□ 0.9
GTF3A-201ENST00000381140 PKMYT1Q99640 499 aa20.69■□□□□ 0.9
GTF3A-201ENST00000381140 CORO1BQ9BR76 489 aa20.69■□□□□ 0.9
GTF3A-201ENST00000381140 COL25A1Q9BXS0 654 aaPredicted RBP20.69■□□□□ 0.9
GTF3A-201ENST00000381140 WDR6Q9NNW5 1121 aaKnown RBP20.69■□□□□ 0.9
GTF3A-201ENST00000381140 DNMT3BQ9UBC3 853 aaKnown RBP20.69■□□□□ 0.9
GTF3A-201ENST00000381140 NFE2L3Q9Y4A8 694 aa20.69■□□□□ 0.9
GTF3A-201ENST00000381140 NCOR1O75376 2440 aa20.69■□□□□ 0.9
GTF3A-201ENST00000381140 HAPLN1P10915 354 aaPredicted RBP20.68■□□□□ 0.9
GTF3A-201ENST00000381140 PTPN1P18031 435 aaKnown RBP20.68■□□□□ 0.9
GTF3A-201ENST00000381140 GBP2P32456 591 aaPredicted RBP20.68■□□□□ 0.9
GTF3A-201ENST00000381140 NDST1P52848 882 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 EPHB3P54753 998 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 CETN1Q12798 172 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 PLD1Q13393 1074 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 IQCEQ6IPM2 695 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 GIPC2Q8TF65 315 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 ZNF512Q96ME7 567 aaPredicted RBP20.68■□□□□ 0.9
GTF3A-201ENST00000381140 BCO2Q9BYV7 579 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 SAMSN1Q9NSI8 373 aaKnown RBP20.68■□□□□ 0.9
GTF3A-201ENST00000381140 CEP72Q9P209 647 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 HMGXB4Q9UGU5 601 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 COQ4Q9Y3A0 265 aa20.68■□□□□ 0.9
GTF3A-201ENST00000381140 SPTBN5Q9NRC6 3674 aaKnown RBP20.68■□□□□ 0.9
GTF3A-201ENST00000381140 PTPN2P17706 415 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 FSHRP23945 695 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 CYP2F1P24903 491 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 TUFMP49411 452 aaKnown RBP20.67■□□□□ 0.9
GTF3A-201ENST00000381140 GPR15P49685 360 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 MRE11P49959 708 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 PABPC1LQ4VXU2 614 aaKnown RBP20.67■□□□□ 0.9
GTF3A-201ENST00000381140 FAM171BQ6P995 826 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 C4orf50Q6ZRC1 276 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 ACOT1Q86TX2 421 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 SCN4BQ8IWT1 228 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 HS6ST3Q8IZP7 471 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 GJD3Q8N144 294 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 TDRD5Q8NAT2 981 aaKnown RBP20.67■□□□□ 0.9
GTF3A-201ENST00000381140 B3GALNT2Q8NCR0 500 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 GPR152Q8TDT2 470 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 ARID3AQ99856 593 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 BPIFA3Q9BQP9 254 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 NAT10Q9H0A0 1025 aaKnown RBP20.67■□□□□ 0.9
GTF3A-201ENST00000381140 GRPEL1Q9HAV7 217 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 CYP3A43Q9HB55 503 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 NR2E1Q9Y466 385 aa20.67■□□□□ 0.9
GTF3A-201ENST00000381140 A0A0C4DFX4 3053 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 GREB1Q4ZG55 1949 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 KCNJ18B7U540 433 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 C2CD4DB7Z1M9 353 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 PAPLNO95428 1278 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 RHOP08100 348 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 MYL4P12829 197 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 PRKCSHP14314 528 aaPredicted RBP20.66■□□□□ 0.9
GTF3A-201ENST00000381140 ATF6P18850 670 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 ZNF165P49910 485 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 KCNJ12Q14500 433 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 VEPH1Q14D04 833 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 MAPRE1Q15691 268 aaKnown RBP20.66■□□□□ 0.9
GTF3A-201ENST00000381140 SDHAF4Q5VUM1 108 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 STKLD1Q8NE28 680 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 MYCBPAPQ8TBZ2 947 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 ENOX1Q8TC92 643 aaKnown RBP20.66■□□□□ 0.9
GTF3A-201ENST00000381140 ING5Q8WYH8 240 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms