RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 SMG5Q9UPR3 1016 aaKnown RBP13.33□□□□□ -0.28
PUDP-201ENST00000381077 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 F8VP50 259 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 PRPF4O43172 522 aaKnown RBP eCLIP13.33□□□□□ -0.28
PUDP-201ENST00000381077 SUN1O94901 812 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 VIMP08670 466 aaKnown RBP13.33□□□□□ -0.28
PUDP-201ENST00000381077 BRAFP15056 766 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 ATF7P17544 494 aaPredicted RBP13.33□□□□□ -0.28
PUDP-201ENST00000381077 PCK1P35558 622 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 ARSEP51690 589 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 TRIP13Q15645 432 aaPredicted RBP13.33□□□□□ -0.28
PUDP-201ENST00000381077 SEZ6Q53EL9 994 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 RNASEH2BQ5TBB1 312 aaKnown RBP13.33□□□□□ -0.28
PUDP-201ENST00000381077 PHLDB2Q86SQ0 1253 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 UHMK1Q8TAS1 419 aaKnown RBP13.33□□□□□ -0.28
PUDP-201ENST00000381077 AFG1LQ8WV93 481 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 TFAP2BQ92481 460 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 NAALADL1Q9UQQ1 740 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 CFAP73A6NFT4 308 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 C3orf70A6NLC5 250 aaPredicted RBP13.32□□□□□ -0.28
PUDP-201ENST00000381077 INO80B-WBP1J3KQ70 363 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 VDRP11473 427 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 PSMA2P25787 234 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 HNRNPH1P31943 449 aaKnown RBP13.32□□□□□ -0.28
PUDP-201ENST00000381077 SCTRP47872 440 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 OGDHQ02218 1023 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 LAMC2Q13753 1193 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 ZFYVE27Q5T4F4 411 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 UBAP2Q5T6F2 1119 aaKnown RBP13.32□□□□□ -0.28
PUDP-201ENST00000381077 EFCAB12Q6NXP0 572 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 RGS9BPQ6ZS82 235 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 LINC01465Q8N7H1 131 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 MAML1Q92585 1016 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 EMID1Q96A84 441 aaPredicted RBP13.32□□□□□ -0.28
PUDP-201ENST00000381077 INO80BQ9C086 356 aaPredicted RBP13.32□□□□□ -0.28
PUDP-201ENST00000381077 SLC12A4Q9UP95 1085 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 C2CD2Q9Y426 696 aa13.32□□□□□ -0.28
PUDP-201ENST00000381077 USP15Q9Y4E8 981 aaPredicted RBP13.32□□□□□ -0.28
PUDP-201ENST00000381077 LRRD1A4D1F6 860 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 CILPO75339 1184 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 C22orf31O95567 290 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 RAD23BP54727 409 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 PTPN11Q06124 597 aaPredicted RBP13.31□□□□□ -0.28
PUDP-201ENST00000381077 INCA1Q0VD86 236 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 SWT1Q5T5J6 900 aaKnown RBP13.31□□□□□ -0.28
PUDP-201ENST00000381077 TRPM8Q7Z2W7 1104 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 LRRC71Q8N4P6 559 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 CMASQ8NFW8 434 aaPredicted RBP13.31□□□□□ -0.28
PUDP-201ENST00000381077 MAGEC3Q8TD91 643 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 MCRS1Q96EZ8 462 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 RBPJLQ9UBG7 517 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 FARP1Q9Y4F1 1045 aaPredicted RBP13.31□□□□□ -0.28
PUDP-201ENST00000381077 SBF1O95248 1867 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.31□□□□□ -0.28
PUDP-201ENST00000381077 EXOC1LA0A1B0GW35 172 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 UNCXA6NJT0 531 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 LRCH4O75427 683 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 KRT10P13645 584 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 MARK3P27448 753 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 PHBP35232 272 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 GJC1P36383 396 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 IL9RQ01113 521 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 GPS1Q13098 491 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 ACVR2BQ13705 512 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 LLGL1Q15334 1064 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 KCTD19Q17RG1 926 aaPredicted RBP13.31□□□□□ -0.28
PUDP-201ENST00000381077 DAB2IPQ5VWQ8 1189 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 PPIL6Q8IXY8 311 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 C1orf127Q8N9H9 656 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 TMEM176AQ96HP8 235 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 NLRP4Q96MN2 994 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 ASNSD1Q9NWL6 643 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
PUDP-201ENST00000381077 FAM47DPA6NHR8 397 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 E7ESA3 106 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 APOC4-APOC2K7ER74 178 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 RNF8O76064 485 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 APOC2P02655 101 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 TXNP10599 105 aaKnown RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 KDELR1P24390 212 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 VPS41P49754 854 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 PSMC1P62191 440 aaKnown RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 WDR72Q3MJ13 1102 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 ATP13A4Q4VNC1 1196 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 ICE2Q659A1 982 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 KAZNQ674X7 775 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 DENND1BQ6P3S1 775 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 APBB1IPQ7Z5R6 666 aaPredicted RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 TRABD2AQ86V40 505 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 XYLT1Q86Y38 959 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 CXorf38Q8TB03 319 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 PRCCQ92733 491 aaPredicted RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 USP6NLQ92738 828 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 FRMD8Q9BZ67 464 aaPredicted RBP13.3□□□□□ -0.28
PUDP-201ENST00000381077 RSAD1Q9HA92 442 aa13.3□□□□□ -0.28
PUDP-201ENST00000381077 VTA1Q9NP79 307 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms